myRT

myRT report for GCA_900581195.1_p12.B10

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Seq: UTDD01000023.1 Pseudomonas sp. 286 isolate p12.B10 genome assembly, contig: 23, whole genome shotgun sequence (418099 bp)
Overview 1 RT 1: 359454-363671 bp Neighborhood of RT #1 [359454, 363697] DUF4263 TnpB_IS66 RVT-GII GIIM TnpB_IS66 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C Feature: gene Location: 359454-359948 bp Feature: domain Description: DUF4263 Location: 359577-359916 bp Feature: domain Description: DUF4263 Location: 359577-35991 6 bp Feature: gene Location: 359947-360255 bp Feature: domain Description: TnpB_IS66 Location: 359977-360130 bp Feature: domain Description: TnpB_IS66 Location: 359977-3601 30 bp Feature: gene Location: 360662-361930 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 360866-361523 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 360866-361 523 bp Feature: domain Description: GIIM Note: maturase Location: 361601-361823 bp Feature: domain Description: GIIM Note: maturase Location: 361 601 -361 823 bp Feature: gene Location: 361964-362167 bp Feature: domain Description: TnpB_IS66 Location: 361988-362132 bp Feature: domain Description: TnpB_IS66 Location: 361 988-3621 32 bp Feature: gene Location: 362195-363697 bp Feature: domain Description: LZ_Tnp_IS66 Location: 362273-362483 bp Feature: domain Description: LZ_Tnp_IS66 Location: 362273-362483 bp Feature: domain Description: zf-IS66 Location: 362513-362636 bp Feature: domain Description: zf-IS66 Location: 36251 3-362636 bp Feature: domain Description: DDE_Tnp_IS66 Location: 362681-363536 bp Feature: domain Description: DDE_Tnp_IS66 Location: 362681 -363536 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 363557-363671 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 363557-363671 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4263 (pfam14082), TnpB_IS66 (pfam05717), RVT-GII, GIIM (pfam08388), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817)