myRT

myRT report for GCA_900581355.1_p12.D1

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Seq: UTDW01000076.1 Pseudomonas sp. 286 isolate p12.D1 genome assembly, contig: 76, whole genome shotgun sequence (451197 bp)
Overview 1 RT 1: 342523-351482 bp Neighborhood of RT #1 [342523, 351640] ParE COG3905 RVT-UG5 BRR2 BRR2 Integrase_1 Feature: gene Location: 342523-342813 bp Feature: domain Description: ParE Location: 342526-342796 bp Feature: domain Description: ParE Location: 342526-342796 bp Feature: gene Location: 342776-343039 bp Feature: domain Description: COG3905 Location: 342791-342998 bp Feature: domain Description: COG3905 Location: 342791 -342998 bp Feature: gene Location: 343706-346942 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 344234-344717 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 344234-34471 7 bp Feature: gene Location: 347158-349275 bp Feature: domain Description: BRR2 Location: 347410-347794 bp Feature: domain Description: BRR2 Location: 34741 0-347794 bp Feature: domain Description: BRR2 Location: 348064-348634 bp Feature: domain Description: BRR2 Location: 348064-348634 bp Feature: gene Location: 350660-351640 bp Feature: domain Description: Integrase_1 Location: 351047-351482 bp Feature: domain Description: Integrase_1 Location: 351 047-351 482 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: UTDW01000001.1 Pseudomonas sp. 286 isolate p12.D1 genome assembly, contig: 1, whole genome shotgun sequence (492999 bp)
Overview 1 RT 1: 330413-333007 bp 2 RT 2: 349722-359152 bp Neighborhood of RT #1 [330413, 333007] CxxC_CXXC_SSSS RVT-G2L4 Neighborhood of RT #2 [349722, 359208] TraI_2 TraI_2_C RVT-Retrons DUF4297 DUF1837 Feature: gene Location: 330413-330874 bp Feature: gene Location: 330991-331173 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 331021-331126 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 33102 1-33112 6 bp Feature: gene Location: 331278-332567 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 331524-332109 bp Feature: RT Description: RVT-G2 L4 Note: G2 L4 RT Location: 33152 4-332 109 bp Feature: gene Location: 332602-332796 bp Feature: gene Location: 332876-333007 bp Feature: gene Location: 349722-351446 bp Feature: domain Description: TraI_2 Location: 349791-350727 bp Feature: domain Description: TraI_2 Location: 349791-35072 7 bp Feature: domain Description: TraI_2_C Location: 351072-351432 bp Feature: domain Description: TraI_2 _C Location: 351072 -351432 bp Feature: gene Location: 353284-354477 bp Feature: gene Location: 354504-355679 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 354780-355407 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 354780-355407 bp Feature: gene Location: 355866-357101 bp Feature: gene Location: 357592-359208 bp Feature: domain Description: DUF4297 Location: 357619-358219 bp Feature: domain Description: DUF42 97 Location: 357619-3582 19 bp Feature: domain Description: DUF1837 Location: 358474-359152 bp Feature: domain Description: DUF1837 Location: 358474-359152 bp Sorry, your browser does not support inline SVG.
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