myRT

myRT report for GCA_900581395.1_p12.C9

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Seq: UTDY01000148.1 Pseudomonas sp. 286 isolate p12.C9 genome assembly, contig: 148, whole genome shotgun sequence (72778 bp)
Overview 1 RT 1: 61152-68822 bp Neighborhood of RT #1 [61152, 68839] DUF1837 BRR2 BRR2 RVT-UG5 COG3905 ParE Feature: gene Location: 61152-62117 bp Feature: domain Description: DUF1837 Location: 61284-62007 bp Feature: domain Description: DUF1 837 Location: 61 284-62007 bp Feature: gene Location: 62087-64204 bp Feature: domain Description: BRR2 Location: 62339-62723 bp Feature: domain Description: BRR2 Location: 62339-62723 bp Feature: domain Description: BRR2 Location: 62993-63563 bp Feature: domain Description: BRR2 Location: 62993-63563 bp Feature: gene Location: 64420-67656 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 64948-65431 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 64948-65431 bp Feature: gene Location: 68323-68586 bp Feature: domain Description: COG3905 Location: 68338-68545 bp Feature: domain Description: COG3905 Location: 68338-68545 bp Feature: gene Location: 68549-68839 bp Feature: domain Description: ParE Location: 68552-68822 bp Feature: domain Description: ParE Location: 68552-68822 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1837 (pfam08878), BRR2 (COG1204), RVT-UG5, COG3905 (Predicted transcriptional regulator ), ParE (COG3668)

Seq: UTDY01000098.1 Pseudomonas sp. 286 isolate p12.C9 genome assembly, contig: 98, whole genome shotgun sequence (85436 bp)
Overview 1 RT 1: 81159-83753 bp Neighborhood of RT #1 [81159, 83753] CxxC_CXXC_SSSS RVT-G2L4 Feature: gene Location: 81159-81620 bp Feature: gene Location: 81737-81919 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 81767-81872 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 81767-81872 bp Feature: gene Location: 82024-83331 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 82288-82873 bp Feature: RT Description: RVT-G2 L4 Note: G2 L4 RT Location: 82 2 88-82 873 bp Feature: gene Location: 83348-83542 bp Feature: gene Location: 83622-83753 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CxxC_CXXC_SSSS (smart00834), RVT-G2L4

Seq: UTDY01000017.1 Pseudomonas sp. 286 isolate p12.C9 genome assembly, contig: 17, whole genome shotgun sequence (46024 bp)
Overview 1 RT 1: 7133-14251 bp Neighborhood of RT #1 [7133, 14307] HEPN_MAE_28990 RVT-Retrons DUF4297 DUF1837 Feature: gene Location: 7133-8104 bp Feature: domain Description: HEPN_MAE_28990 Location: 7277-7526 bp Feature: domain Description: HEPN_MAE_28990 Location: 7277-7526 bp Feature: gene Location: 8383-9576 bp Feature: gene Location: 9603-10778 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9879-10506 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9879-10506 bp Feature: gene Location: 10965-12200 bp Feature: gene Location: 12691-14307 bp Feature: domain Description: DUF4297 Location: 12718-13318 bp Feature: domain Description: DUF4297 Location: 12718-13 3 18 bp Feature: domain Description: DUF1837 Location: 13573-14251 bp Feature: domain Description: DUF183 7 Location: 13 573 -14251 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HEPN_MAE_28990 (pfam18737), RVT-Retrons, DUF4297 (pfam14130), DUF1837 (pfam08878)