myRT

myRT report for GCA_900581555.1_p12.F11

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Seq: UTEP01000048.1 Pseudomonas sp. 286 isolate p12.F11 genome assembly, contig: 48, whole genome shotgun sequence (4731 bp)
Overview 1 RT 1: 2-4161 bp Neighborhood of RT #1 [2, 4238] TnpB_IS66 RVT-GII GIIM HEPN_Apea PRK09862 Feature: gene Location: 2-349 bp Feature: domain Description: TnpB_IS66 Location: 32-326 bp Feature: domain Description: TnpB_IS66 Location: 32-326 bp Feature: gene Location: 488-751 bp Feature: gene Location: 738-2288 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1200-1890 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 200-1 890 bp Feature: domain Description: GIIM Note: maturase Location: 1950-2178 bp Feature: domain Description: GIIM Note: maturase Location: 1 950-21 78 bp Feature: gene Location: 2563-3864 bp Feature: domain Description: HEPN_Apea Location: 3493-3745 bp Feature: domain Description: HEPN_Apea Location: 3493-3745 bp Feature: gene Location: 3957-4238 bp Feature: domain Description: PRK09862 Location: 3960-4161 bp Feature: domain Description: PRK09862 Location: 3960-41 61 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HEPN_Apea (pfam18739), PRK09862 (ATP-dependent protease), RVT-GII, GIIM (pfam08388)