myRT

myRT report for GCA_900581715.1_p12.H3

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Seq: UTFF01000001.1 Pseudomonas sp. 286 isolate p12.H3 genome assembly, contig: 1, whole genome shotgun sequence (714404 bp)
Overview 1 RT 1: 341379-351670 bp Neighborhood of RT #1 [341379, 351670] LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C TnpB_IS66 dnaG group_II_RT_mat RVT-UNC Feature: gene Location: 341379-342863 bp Feature: domain Description: LZ_Tnp_IS66 Location: 341466-341673 bp Feature: domain Description: LZ_Tnp_IS66 Location: 341 466-341 673 bp Feature: domain Description: zf-IS66 Location: 341703-341826 bp Feature: domain Description: zf-IS66 Location: 341 703-341 826 bp Feature: domain Description: DDE_Tnp_IS66 Location: 341871-342702 bp Feature: domain Description: DDE_Tnp_IS66 Location: 341 871 -342702 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 342723-342837 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 342723-342837 bp Feature: gene Location: 342882-343241 bp Feature: domain Description: TnpB_IS66 Location: 342912-343206 bp Feature: domain Description: TnpB_IS66 Location: 34291 2-343206 bp Feature: gene Location: 343540-351078 bp Feature: domain Description: dnaG Location: 343576-344788 bp Feature: domain Description: dnaG Location: 343576-344788 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 345115-345358 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 3451 1 5-345358 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 345475-346099 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 345475-346099 bp Feature: gene Location: 351154-351285 bp Feature: gene Location: 351470-351670 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), TnpB_IS66 (pfam05717), dnaG (TIGR01391), group_II_RT_mat (TIGR04416), RVT-UG25/RVT-UG10/RVT-UG19/RVT-DGRs(RVT-UNC)

Seq: UTFF01000081.1 Pseudomonas sp. 286 isolate p12.H3 genome assembly, contig: 81, whole genome shotgun sequence (385029 bp)
Overview 1 RT 1: 60515-65330 bp Neighborhood of RT #1 [60515, 65389] NfsA_FRP STKc_PknB_like RVT-UG2 5-nucleotidase Feature: gene Location: 60515-60970 bp Feature: domain Description: NfsA_FRP Location: 60524-60884 bp Feature: domain Description: NfsA_FRP Location: 6052 4-60884 bp Feature: gene Location: 61053-62234 bp Feature: domain Description: STKc_PknB_like Location: 61314-62079 bp Feature: domain Description: STKc_PknB_like Location: 61314-62 079 bp Feature: gene Location: 62495-63787 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 62687-63479 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 62 687-63479 bp Feature: gene Location: 64061-64327 bp Feature: gene Location: 64409-65389 bp Feature: domain Description: 5-nucleotidase Location: 64523-65330 bp Feature: domain Description: 5-nucleotidase Location: 6452 3-65330 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NfsA_FRP, STKc_PknB_like (cd14014), RVT-UG2, 5-nucleotidase (pfam06189)