myRT

myRT report for GCA_900582005.1_p13.C1

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Seq: UTGJ01000006.1 Pseudomonas sp. 286 isolate p13.C1 genome assembly, contig: 6, whole genome shotgun sequence (161641 bp)
Overview 1 RT 1: 61311-68981 bp Neighborhood of RT #1 [61311, 68998] DUF1837 BRR2 BRR2 RVT-UG5 COG3905 ParE Feature: gene Location: 61311-62276 bp Feature: domain Description: DUF1837 Location: 61443-62166 bp Feature: domain Description: DUF1 837 Location: 61 443-621 66 bp Feature: gene Location: 62246-64363 bp Feature: domain Description: BRR2 Location: 62498-62882 bp Feature: domain Description: BRR2 Location: 62498-62882 bp Feature: domain Description: BRR2 Location: 63152-63722 bp Feature: domain Description: BRR2 Location: 631 52-63722 bp Feature: gene Location: 64579-67815 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 65107-65590 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 651 07-65590 bp Feature: gene Location: 68482-68745 bp Feature: domain Description: COG3905 Location: 68497-68704 bp Feature: domain Description: COG3905 Location: 68497-68704 bp Feature: gene Location: 68708-68998 bp Feature: domain Description: ParE Location: 68711-68981 bp Feature: domain Description: ParE Location: 6871 1 -68981 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1837 (pfam08878), BRR2 (COG1204), RVT-UG5, COG3905 (Predicted transcriptional regulator ), ParE (COG3668)

Seq: UTGJ01000079.1 Pseudomonas sp. 286 isolate p13.C1 genome assembly, contig: 79, whole genome shotgun sequence (826844 bp)
Overview 1 RT 1: 412829-419075 bp 2 RT 2: 437842-441624 bp Neighborhood of RT #1 [412829, 419075] DUF4297 DUF1837 RVT-Retrons Neighborhood of RT #2 [437842, 441624] xerC RVT-G2L4 CxxC_CXXC_SSSS Feature: gene Location: 412829-414445 bp Feature: domain Description: DUF4297 Location: 412856-413456 bp Feature: domain Description: DUF42 97 Location: 412 856-413456 bp Feature: domain Description: DUF1837 Location: 413711-414389 bp Feature: domain Description: DUF1837 Location: 413711-414389 bp Feature: gene Location: 414936-416171 bp Feature: gene Location: 416358-417533 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 416634-417261 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 416634-4172 61 bp Feature: gene Location: 417560-418753 bp Feature: gene Location: 418803-419075 bp Feature: gene Location: 437842-438648 bp Feature: domain Description: xerC Location: 437998-438634 bp Feature: domain Description: xerC Location: 437998-438634 bp Feature: gene Location: 439241-439435 bp Feature: gene Location: 439470-440759 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 439716-440301 bp Feature: RT Description: RVT-G2 L4 Note: G2 L4 RT Location: 439716-440301 bp Feature: gene Location: 440864-441046 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 440894-440999 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 440894-440999 bp Feature: gene Location: 441163-441624 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4297 (pfam14130), DUF1837 (pfam08878), RVT-Retrons, xerC (PRK01287), RVT-G2L4, CxxC_CXXC_SSSS (smart00834)