myRT

myRT report for GCA_900584655.1_p21.D3

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Seq: UTQP01000068.1 (519979 bp)
Overview 1 RT 1: 252813-259059 bp 2 RT 2: 277826-281608 bp Neighborhood of RT #1 [252813, 259059] DUF4297 DUF1837 RVT-Retrons Neighborhood of RT #2 [277826, 281608] xerC RVT-G2L4 CxxC_CXXC_SSSS Feature: gene Location: 252813-254429 bp Feature: domain Description: DUF4297 Location: 252840-253440 bp Feature: domain Description: DUF4297 Location: 252840-253440 bp Feature: domain Description: DUF1837 Location: 253695-254373 bp Feature: domain Description: DUF1 837 Location: 253695-254373 bp Feature: gene Location: 254920-256155 bp Feature: gene Location: 256342-257517 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 256618-257245 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 25661 8-257245 bp Feature: gene Location: 257544-258737 bp Feature: gene Location: 258787-259059 bp Feature: gene Location: 277826-278632 bp Feature: domain Description: xerC Location: 277982-278618 bp Feature: domain Description: xerC Location: 277982-27861 8 bp Feature: gene Location: 279225-279419 bp Feature: gene Location: 279454-280743 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 279700-280285 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 279700-280285 bp Feature: gene Location: 280848-281030 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 280878-280983 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 280878-280983 bp Feature: gene Location: 281147-281608 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4297 (pfam14130), DUF1837 (pfam08878), RVT-Retrons, xerC (PRK01287), RVT-G2L4, CxxC_CXXC_SSSS (smart00834)

Seq: UTQP01000070.1 (389156 bp)
Overview 1 RT 1: 375977-385077 bp Neighborhood of RT #1 [375977, 385094] Integrase_1 BRR2 BRR2 RVT-UG5 COG3905 ParE Feature: gene Location: 375977-376957 bp Feature: domain Description: Integrase_1 Location: 376364-376799 bp Feature: domain Description: Integrase_1 Location: 376364-376799 bp Feature: gene Location: 378342-380459 bp Feature: domain Description: BRR2 Location: 378594-378978 bp Feature: domain Description: BRR2 Location: 378594-378978 bp Feature: domain Description: BRR2 Location: 379248-379818 bp Feature: domain Description: BRR2 Location: 3792 48-379818 bp Feature: gene Location: 380675-383911 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 381203-381686 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 3812 03-381686 bp Feature: gene Location: 384578-384841 bp Feature: domain Description: COG3905 Location: 384593-384800 bp Feature: domain Description: COG3905 Location: 384593-384800 bp Feature: gene Location: 384804-385094 bp Feature: domain Description: ParE Location: 384807-385077 bp Feature: domain Description: ParE Location: 384807-385077 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Integrase_1 (pfam12835), BRR2 (COG1204), RVT-UG5, COG3905 (Predicted transcriptional regulator ), ParE (COG3668)