myRT

myRT report for GCA_900584675.1_p21.B3

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Seq: UTQQ01000001.1 (520008 bp)
Overview 1 RT 1: 252807-259053 bp 2 RT 2: 277820-281602 bp Neighborhood of RT #1 [252807, 259053] DUF4297 DUF1837 RVT-Retrons Neighborhood of RT #2 [277820, 281602] xerC RVT-G2L4 CxxC_CXXC_SSSS Feature: gene Location: 252807-254423 bp Feature: domain Description: DUF4297 Location: 252834-253434 bp Feature: domain Description: DUF4297 Location: 252834-253434 bp Feature: domain Description: DUF1837 Location: 253689-254367 bp Feature: domain Description: DUF1 837 Location: 253689-254367 bp Feature: gene Location: 254914-256149 bp Feature: gene Location: 256336-257511 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 256612-257239 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 25661 2-257239 bp Feature: gene Location: 257538-258731 bp Feature: gene Location: 258781-259053 bp Feature: gene Location: 277820-278626 bp Feature: domain Description: xerC Location: 277976-278612 bp Feature: domain Description: xerC Location: 277976-27861 2 bp Feature: gene Location: 279219-279413 bp Feature: gene Location: 279448-280737 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 279694-280279 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 279694-280279 bp Feature: gene Location: 280842-281024 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 280872-280977 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 280872-280977 bp Feature: gene Location: 281141-281602 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4297 (pfam14130), DUF1837 (pfam08878), RVT-Retrons, xerC (PRK01287), RVT-G2L4, CxxC_CXXC_SSSS (smart00834)

Seq: UTQQ01000029.1 (72887 bp)
Overview 1 RT 1: 61311-68981 bp Neighborhood of RT #1 [61311, 68998] DUF1837 BRR2 BRR2 RVT-UG5 COG3905 ParE Feature: gene Location: 61311-62276 bp Feature: domain Description: DUF1837 Location: 61443-62166 bp Feature: domain Description: DUF1837 Location: 61443-62 166 bp Feature: gene Location: 62246-64363 bp Feature: domain Description: BRR2 Location: 62498-62882 bp Feature: domain Description: BRR2 Location: 62 498-62 882 bp Feature: domain Description: BRR2 Location: 63152-63722 bp Feature: domain Description: BRR2 Location: 63152 -6372 2 bp Feature: gene Location: 64579-67815 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 65107-65590 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 65107-65590 bp Feature: gene Location: 68482-68745 bp Feature: domain Description: COG3905 Location: 68497-68704 bp Feature: domain Description: COG3905 Location: 68497-68704 bp Feature: gene Location: 68708-68998 bp Feature: domain Description: ParE Location: 68711-68981 bp Feature: domain Description: ParE Location: 68711-68981 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1837 (pfam08878), BRR2 (COG1204), RVT-UG5, COG3905 (Predicted transcriptional regulator ), ParE (COG3668)