myRT

myRT report for GCA_900584815.1_p21.E3

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Seq: UTRF01000004.1 (523344 bp)
Overview 1 RT 1: 256176-262422 bp 2 RT 2: 281189-284971 bp Neighborhood of RT #1 [256176, 262422] DUF4297 DUF1837 RVT-Retrons Neighborhood of RT #2 [281189, 284971] xerC RVT-G2L4 CxxC_CXXC_SSSS Feature: gene Location: 256176-257792 bp Feature: domain Description: DUF4297 Location: 256203-256803 bp Feature: domain Description: DUF4297 Location: 256203-256803 bp Feature: domain Description: DUF1837 Location: 257058-257736 bp Feature: domain Description: DUF1 837 Location: 257058-257736 bp Feature: gene Location: 258283-259518 bp Feature: gene Location: 259705-260880 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 259981-260608 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 259981 -260608 bp Feature: gene Location: 260907-262100 bp Feature: gene Location: 262150-262422 bp Feature: gene Location: 281189-281995 bp Feature: domain Description: xerC Location: 281345-281981 bp Feature: domain Description: xerC Location: 281 345-281 981 bp Feature: gene Location: 282588-282782 bp Feature: gene Location: 282817-284106 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 283063-283648 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 283063-283648 bp Feature: gene Location: 284211-284393 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 284241-284346 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 284241 -284346 bp Feature: gene Location: 284510-284971 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4297 (pfam14130), DUF1837 (pfam08878), RVT-Retrons, xerC (PRK01287), RVT-G2L4, CxxC_CXXC_SSSS (smart00834)

Seq: UTRF01000048.1 (578838 bp)
Overview 1 RT 1: 26186-35145 bp Neighborhood of RT #1 [26186, 35303] ParE COG3905 RVT-UG5 BRR2 BRR2 Integrase_1 Feature: gene Location: 26186-26476 bp Feature: domain Description: ParE Location: 26189-26459 bp Feature: domain Description: ParE Location: 2 6189-2 6459 bp Feature: gene Location: 26439-26702 bp Feature: domain Description: COG3905 Location: 26454-26661 bp Feature: domain Description: COG3905 Location: 2 6454-2 6661 bp Feature: gene Location: 27369-30605 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 27897-28380 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2 7897-2 8380 bp Feature: gene Location: 30821-32938 bp Feature: domain Description: BRR2 Location: 31073-31457 bp Feature: domain Description: BRR2 Location: 31073-31457 bp Feature: domain Description: BRR2 Location: 31727-32297 bp Feature: domain Description: BRR2 Location: 3172 7-32 2 97 bp Feature: gene Location: 34323-35303 bp Feature: domain Description: Integrase_1 Location: 34710-35145 bp Feature: domain Description: Integrase_1 Location: 34710-35145 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ParE (COG3668), COG3905 (Predicted transcriptional regulator ), RVT-UG5, BRR2 (COG1204), Integrase_1 (pfam12835)