myRT

myRT report for GCA_900585015.1_p21.G4

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Seq: UTSA01000001.1 (528653 bp)
Overview 1 RT 1: 51914-62205 bp Neighborhood of RT #1 [51914, 62205] LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C TnpB_IS66 dnaG group_II_RT_mat RVT-UNC Feature: gene Location: 51914-53398 bp Feature: domain Description: LZ_Tnp_IS66 Location: 52001-52208 bp Feature: domain Description: LZ_Tnp_IS66 Location: 52001 -52208 bp Feature: domain Description: zf-IS66 Location: 52238-52361 bp Feature: domain Description: zf-IS66 Location: 52238-52361 bp Feature: domain Description: DDE_Tnp_IS66 Location: 52406-53237 bp Feature: domain Description: DDE_Tnp_IS66 Location: 52406-53237 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 53258-53372 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 53258-53372 bp Feature: gene Location: 53417-53776 bp Feature: domain Description: TnpB_IS66 Location: 53447-53741 bp Feature: domain Description: TnpB_IS66 Location: 53447-53741 bp Feature: gene Location: 54075-61613 bp Feature: domain Description: dnaG Location: 54111-55323 bp Feature: domain Description: dnaG Location: 541 1 1 -55323 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 55650-55893 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 55650-55893 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 56010-56634 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 5601 0-56634 bp Feature: gene Location: 61689-61820 bp Feature: gene Location: 62005-62205 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), TnpB_IS66 (pfam05717), dnaG (TIGR01391), group_II_RT_mat (TIGR04416), RVT-UG25/RVT-UG10/RVT-UG19/RVT-DGRs(RVT-UNC)

Seq: UTSA01000034.1 (409902 bp)
Overview 1 RT 1: 300991-305806 bp Neighborhood of RT #1 [300991, 305865] NfsA_FRP STKc_PknB_like RVT-UG2 5-nucleotidase Feature: gene Location: 300991-301446 bp Feature: domain Description: NfsA_FRP Location: 301000-301360 bp Feature: domain Description: NfsA_FRP Location: 301000-301360 bp Feature: gene Location: 301529-302710 bp Feature: domain Description: STKc_PknB_like Location: 301790-302555 bp Feature: domain Description: STKc_PknB_like Location: 301790-302 555 bp Feature: gene Location: 302971-304263 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 303163-303955 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 303163-303955 bp Feature: gene Location: 304537-304803 bp Feature: gene Location: 304885-305865 bp Feature: domain Description: 5-nucleotidase Location: 304999-305806 bp Feature: domain Description: 5-nucleotidase Location: 304999-305806 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NfsA_FRP, STKc_PknB_like (cd14014), RVT-UG2, 5-nucleotidase (pfam06189)