myRT

myRT report for GCA_900585035.1_p21.G3

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Seq: UTSB01000006.1 (355 bp)
Overview 1 RT 1: 2-353 bp Neighborhood of RT #1 [2, 352] RVT-GII GIIM Feature: gene Location: 2-352 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-185 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-1 85 bp Feature: domain Description: GIIM Note: maturase Location: 239-353 bp Feature: domain Description: GIIM Note: maturase Location: 239-353 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: UTSB01000061.1 (519981 bp)
Overview 1 RT 1: 252787-259033 bp 2 RT 2: 277800-281582 bp Neighborhood of RT #1 [252787, 259033] DUF4297 DUF1837 RVT-Retrons Neighborhood of RT #2 [277800, 281582] xerC RVT-G2L4 CxxC_CXXC_SSSS Feature: gene Location: 252787-254403 bp Feature: domain Description: DUF4297 Location: 252814-253414 bp Feature: domain Description: DUF42 97 Location: 2 52 814-2 53414 bp Feature: domain Description: DUF1837 Location: 253669-254347 bp Feature: domain Description: DUF1837 Location: 2 53669-2 54347 bp Feature: gene Location: 254894-256129 bp Feature: gene Location: 256316-257491 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 256592-257219 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 56592 -2 572 19 bp Feature: gene Location: 257518-258711 bp Feature: gene Location: 258761-259033 bp Feature: gene Location: 277800-278606 bp Feature: domain Description: xerC Location: 277956-278592 bp Feature: domain Description: xerC Location: 2 77956-2 78592 bp Feature: gene Location: 279199-279393 bp Feature: gene Location: 279428-280717 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 279674-280259 bp Feature: RT Description: RVT-G2 L4 Note: G2 L4 RT Location: 2 79674-2 802 59 bp Feature: gene Location: 280822-281004 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 280852-280957 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 2 80852 -2 80957 bp Feature: gene Location: 281121-281582 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4297 (pfam14130), DUF1837 (pfam08878), RVT-Retrons, xerC (PRK01287), RVT-G2L4, CxxC_CXXC_SSSS (smart00834)