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myRT report for GCA_900585245.1_p22.B5
Download annotations/find similar RTs
Seq:
UTSV01000051.1 (486150 bp)
Overview
1
RT 1: 213420-219666 bp
2
RT 2: 238433-242215 bp
Neighborhood of RT #1 [213420, 219666]
DUF4297
DUF1837
RVT-Retrons
Neighborhood of RT #2 [238433, 242215]
xerC
RVT-G2L4
CxxC_CXXC_SSSS
Feature: gene
Location: 213420-215036 bp
Feature: domain
Description: DUF4297
Location: 213447-214047 bp
Feature: domain
Description: DUF4297
Location: 21 3447-21 4047 bp
Feature: domain
Description: DUF1837
Location: 214302-214980 bp
Feature: domain
Description: DUF1 837
Location: 21 4302-21 4980 bp
Feature: gene
Location: 215527-216762 bp
Feature: gene
Location: 216949-218124 bp
Feature: RT
Description: RVT-Retrons
Note: Retrons RT
Location: 217225-217852 bp
Feature: RT
Description: RVT-Retrons
Note: Retrons RT
Location: 21 7225-21 7852 bp
Feature: gene
Location: 218151-219344 bp
Feature: gene
Location: 219394-219666 bp
Feature: gene
Location: 238433-239239 bp
Feature: domain
Description: xerC
Location: 238589-239225 bp
Feature: domain
Description: xerC
Location: 238589-239225 bp
Feature: gene
Location: 239832-240026 bp
Feature: gene
Location: 240061-241350 bp
Feature: RT
Description: RVT-G2L4
Note: G2L4 RT
Location: 240307-240892 bp
Feature: RT
Description: RVT-G2L4
Note: G2L4 RT
Location: 240307-240892 bp
Feature: gene
Location: 241455-241637 bp
Feature: domain
Description: CxxC_CXXC_SSSS
Location: 241485-241590 bp
Feature: domain
Description: CxxC_CXXC_SSSS
Location: 241 485-241 590 bp
Feature: gene
Location: 241754-242215 bp
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Associated domains:
myRT
DUF4297 (pfam14130)
,
DUF1837 (pfam08878)
,
RVT-Retrons
,
xerC (PRK01287)
,
RVT-G2L4
,
CxxC_CXXC_SSSS (smart00834)