myRT

myRT report for GCA_900585315.1_p22.C5

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Seq: UTTC01000004.1 (415351 bp)
Overview 1 RT 1: 223749-229995 bp 2 RT 2: 248762-252544 bp Neighborhood of RT #1 [223749, 229995] DUF4297 DUF1837 RVT-Retrons Neighborhood of RT #2 [248762, 252544] xerC RVT-G2L4 CxxC_CXXC_SSSS Feature: gene Location: 223749-225365 bp Feature: domain Description: DUF4297 Location: 223776-224376 bp Feature: domain Description: DUF4297 Location: 223776-224376 bp Feature: domain Description: DUF1837 Location: 224631-225309 bp Feature: domain Description: DUF1 837 Location: 224631 -225309 bp Feature: gene Location: 225856-227091 bp Feature: gene Location: 227278-228453 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 227554-228181 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 227554-2281 81 bp Feature: gene Location: 228480-229673 bp Feature: gene Location: 229723-229995 bp Feature: gene Location: 248762-249568 bp Feature: domain Description: xerC Location: 248918-249554 bp Feature: domain Description: xerC Location: 24891 8-249554 bp Feature: gene Location: 250161-250355 bp Feature: gene Location: 250390-251679 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 250636-251221 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 250636-251 221 bp Feature: gene Location: 251784-251966 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 251814-251919 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 251 81 4-251 91 9 bp Feature: gene Location: 252083-252544 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4297 (pfam14130), DUF1837 (pfam08878), RVT-Retrons, xerC (PRK01287), RVT-G2L4, CxxC_CXXC_SSSS (smart00834)

Seq: UTTC01000007.1 (188116 bp)
Overview 1 RT 1: 65376-74335 bp Neighborhood of RT #1 [65376, 74493] ParE COG3905 RVT-UG5 BRR2 BRR2 Integrase_1 Feature: gene Location: 65376-65666 bp Feature: domain Description: ParE Location: 65379-65649 bp Feature: domain Description: ParE Location: 65379-65649 bp Feature: gene Location: 65629-65892 bp Feature: domain Description: COG3905 Location: 65644-65851 bp Feature: domain Description: COG3905 Location: 65644-65851 bp Feature: gene Location: 66559-69795 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 67087-67570 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 67087-67570 bp Feature: gene Location: 70011-72128 bp Feature: domain Description: BRR2 Location: 70263-70647 bp Feature: domain Description: BRR2 Location: 702 63-70647 bp Feature: domain Description: BRR2 Location: 70917-71487 bp Feature: domain Description: BRR2 Location: 70917-71487 bp Feature: gene Location: 73513-74493 bp Feature: domain Description: Integrase_1 Location: 73900-74335 bp Feature: domain Description: Integrase_1 Location: 73900-74335 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ParE (COG3668), COG3905 (Predicted transcriptional regulator ), RVT-UG5, BRR2 (COG1204), Integrase_1 (pfam12835)