myRT

myRT report for GCA_900585385.1_p22.D7

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Seq: UTTO01001843.1 (2196 bp)
Overview 1 RT 1: 2-1733 bp Neighborhood of RT #1 [2, 1747] RVT-G2L4 xerC Feature: gene Location: 2-604 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 248-602 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 248-602 bp Feature: gene Location: 607-747 bp Feature: gene Location: 941-1747 bp Feature: domain Description: xerC Location: 1097-1733 bp Feature: domain Description: xerC Location: 1 097-1 733 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-G2L4, xerC (PRK01287)

Seq: UTTO01000482.1 (3543 bp)
Overview 1 RT 1: 237-3540 bp Neighborhood of RT #1 [237, 3540] RVT-Retrons Feature: gene Location: 237-1412 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 513-1140 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 513-1140 bp Feature: gene Location: 1439-2632 bp Feature: gene Location: 2911-3540 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: UTTO01002059.1 (1828 bp)
Overview 1 RT 1: 3-1542 bp Neighborhood of RT #1 [3, 1542] RVT-G2L4 CxxC_CXXC_SSSS Feature: gene Location: 3-677 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 6-219 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 6-219 bp Feature: gene Location: 782-964 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 812-917 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 812-917 bp Feature: gene Location: 1081-1542 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-G2L4, CxxC_CXXC_SSSS (smart00834)

Seq: UTTO01002422.1 (16372 bp)
Overview 1 RT 1: 4849-12519 bp Neighborhood of RT #1 [4849, 12536] DUF1837 BRR2 BRR2 RVT-UG5 COG3905 ParE Feature: gene Location: 4849-5814 bp Feature: domain Description: DUF1837 Location: 4981-5704 bp Feature: domain Description: DUF1837 Location: 4 981-5704 bp Feature: gene Location: 5784-7901 bp Feature: domain Description: BRR2 Location: 6036-6420 bp Feature: domain Description: BRR2 Location: 6036-64 20 bp Feature: domain Description: BRR2 Location: 6690-7260 bp Feature: domain Description: BRR2 Location: 6690-7260 bp Feature: gene Location: 8117-11353 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 8645-9128 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 864 5-9128 bp Feature: gene Location: 11840-12283 bp Feature: domain Description: COG3905 Location: 12035-12239 bp Feature: domain Description: COG3905 Location: 12035-12239 bp Feature: gene Location: 12246-12536 bp Feature: domain Description: ParE Location: 12249-12519 bp Feature: domain Description: ParE Location: 1224 9-12519 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1837 (pfam08878), BRR2 (COG1204), RVT-UG5, COG3905 (Predicted transcriptional regulator ), ParE (COG3668)