myRT

myRT report for GCA_900585525.1_p22.E4

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Seq: UTTU01000030.1 (246117 bp)
Overview 1 RT 1: 26180-35139 bp Neighborhood of RT #1 [26180, 35297] ParE COG3905 RVT-UG5 BRR2 BRR2 Integrase_1 Feature: gene Location: 26180-26470 bp Feature: domain Description: ParE Location: 26183-26453 bp Feature: domain Description: ParE Location: 261 83-26453 bp Feature: gene Location: 26433-26696 bp Feature: domain Description: COG3905 Location: 26448-26655 bp Feature: domain Description: COG3905 Location: 26448-26655 bp Feature: gene Location: 27363-30599 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 27891-28374 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 27891 -28374 bp Feature: gene Location: 30815-32932 bp Feature: domain Description: BRR2 Location: 31067-31451 bp Feature: domain Description: BRR2 Location: 31 067-31 451 bp Feature: domain Description: BRR2 Location: 31721-32291 bp Feature: domain Description: BRR2 Location: 31 721 -32291 bp Feature: gene Location: 34317-35297 bp Feature: domain Description: Integrase_1 Location: 34704-35139 bp Feature: domain Description: Integrase_1 Location: 34704-351 39 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ParE (COG3668), COG3905 (Predicted transcriptional regulator ), RVT-UG5, BRR2 (COG1204), Integrase_1 (pfam12835)

Seq: UTTU01000004.1 (385265 bp)
Overview 1 RT 1: 256198-262444 bp 2 RT 2: 281211-284993 bp Neighborhood of RT #1 [256198, 262444] DUF4297 DUF1837 RVT-Retrons Neighborhood of RT #2 [281211, 284993] xerC RVT-G2L4 CxxC_CXXC_SSSS Feature: gene Location: 256198-257814 bp Feature: domain Description: DUF4297 Location: 256225-256825 bp Feature: domain Description: DUF42 97 Location: 2 562 2 5-2 5682 5 bp Feature: domain Description: DUF1837 Location: 257080-257758 bp Feature: domain Description: DUF1837 Location: 2 57080-2 57758 bp Feature: gene Location: 258305-259540 bp Feature: gene Location: 259727-260902 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 260003-260630 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 60003-2 60630 bp Feature: gene Location: 260929-262122 bp Feature: gene Location: 262172-262444 bp Feature: gene Location: 281211-282017 bp Feature: domain Description: xerC Location: 281367-282003 bp Feature: domain Description: xerC Location: 2 81367-2 82 003 bp Feature: gene Location: 282610-282804 bp Feature: gene Location: 282839-284128 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 283085-283670 bp Feature: RT Description: RVT-G2 L4 Note: G2 L4 RT Location: 2 83085-2 83670 bp Feature: gene Location: 284233-284415 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 284263-284368 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 2 842 63-2 84368 bp Feature: gene Location: 284532-284993 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4297 (pfam14130), DUF1837 (pfam08878), RVT-Retrons, xerC (PRK01287), RVT-G2L4, CxxC_CXXC_SSSS (smart00834)