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myRT report for GCA_900585525.1_p22.E4
Download annotations/find similar RTs
Seq:
UTTU01000030.1 (246117 bp)
Overview
1
RT 1: 26180-35139 bp
Neighborhood of RT #1 [26180, 35297]
ParE
COG3905
RVT-UG5
BRR2
BRR2
Integrase_1
Feature: gene
Location: 26180-26470 bp
Feature: domain
Description: ParE
Location: 26183-26453 bp
Feature: domain
Description: ParE
Location: 261 83-26453 bp
Feature: gene
Location: 26433-26696 bp
Feature: domain
Description: COG3905
Location: 26448-26655 bp
Feature: domain
Description: COG3905
Location: 26448-26655 bp
Feature: gene
Location: 27363-30599 bp
Feature: RT
Description: RVT-UG5
Note: UG5 RT
Location: 27891-28374 bp
Feature: RT
Description: RVT-UG5
Note: UG5 RT
Location: 27891 -28374 bp
Feature: gene
Location: 30815-32932 bp
Feature: domain
Description: BRR2
Location: 31067-31451 bp
Feature: domain
Description: BRR2
Location: 31 067-31 451 bp
Feature: domain
Description: BRR2
Location: 31721-32291 bp
Feature: domain
Description: BRR2
Location: 31 721 -32291 bp
Feature: gene
Location: 34317-35297 bp
Feature: domain
Description: Integrase_1
Location: 34704-35139 bp
Feature: domain
Description: Integrase_1
Location: 34704-351 39 bp
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Associated domains:
Seq:
UTTU01000004.1 (385265 bp)
Overview
1
RT 1: 256198-262444 bp
2
RT 2: 281211-284993 bp
Neighborhood of RT #1 [256198, 262444]
DUF4297
DUF1837
RVT-Retrons
Neighborhood of RT #2 [281211, 284993]
xerC
RVT-G2L4
CxxC_CXXC_SSSS
Feature: gene
Location: 256198-257814 bp
Feature: domain
Description: DUF4297
Location: 256225-256825 bp
Feature: domain
Description: DUF42 97
Location: 2 562 2 5-2 5682 5 bp
Feature: domain
Description: DUF1837
Location: 257080-257758 bp
Feature: domain
Description: DUF1837
Location: 2 57080-2 57758 bp
Feature: gene
Location: 258305-259540 bp
Feature: gene
Location: 259727-260902 bp
Feature: RT
Description: RVT-Retrons
Note: Retrons RT
Location: 260003-260630 bp
Feature: RT
Description: RVT-Retrons
Note: Retrons RT
Location: 2 60003-2 60630 bp
Feature: gene
Location: 260929-262122 bp
Feature: gene
Location: 262172-262444 bp
Feature: gene
Location: 281211-282017 bp
Feature: domain
Description: xerC
Location: 281367-282003 bp
Feature: domain
Description: xerC
Location: 2 81367-2 82 003 bp
Feature: gene
Location: 282610-282804 bp
Feature: gene
Location: 282839-284128 bp
Feature: RT
Description: RVT-G2L4
Note: G2L4 RT
Location: 283085-283670 bp
Feature: RT
Description: RVT-G2 L4
Note: G2 L4 RT
Location: 2 83085-2 83670 bp
Feature: gene
Location: 284233-284415 bp
Feature: domain
Description: CxxC_CXXC_SSSS
Location: 284263-284368 bp
Feature: domain
Description: CxxC_CXXC_SSSS
Location: 2 842 63-2 84368 bp
Feature: gene
Location: 284532-284993 bp
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Associated domains: