myRT

myRT report for GCA_900585545.1_p22.F5

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Seq: UTUA01000023.1 (146673 bp)
Overview 1 RT 1: 60019-69119 bp Neighborhood of RT #1 [60019, 69136] Integrase_1 BRR2 BRR2 RVT-UG5 COG3905 ParE Feature: gene Location: 60019-60999 bp Feature: domain Description: Integrase_1 Location: 60406-60841 bp Feature: domain Description: Integrase_1 Location: 60406-60841 bp Feature: gene Location: 62384-64501 bp Feature: domain Description: BRR2 Location: 62636-63020 bp Feature: domain Description: BRR2 Location: 62636-63020 bp Feature: domain Description: BRR2 Location: 63290-63860 bp Feature: domain Description: BRR2 Location: 63290-63860 bp Feature: gene Location: 64717-67953 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 65245-65728 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 65245-65728 bp Feature: gene Location: 68620-68883 bp Feature: domain Description: COG3905 Location: 68635-68842 bp Feature: domain Description: COG3905 Location: 68635-68842 bp Feature: gene Location: 68846-69136 bp Feature: domain Description: ParE Location: 68849-69119 bp Feature: domain Description: ParE Location: 68849-691 1 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Integrase_1 (pfam12835), BRR2 (COG1204), RVT-UG5, COG3905 (Predicted transcriptional regulator ), ParE (COG3668)

Seq: UTUA01000001.1 (692815 bp)
Overview 1 RT 1: 256198-262444 bp 2 RT 2: 281211-284993 bp Neighborhood of RT #1 [256198, 262444] DUF4297 DUF1837 RVT-Retrons Neighborhood of RT #2 [281211, 284993] xerC RVT-G2L4 CxxC_CXXC_SSSS Feature: gene Location: 256198-257814 bp Feature: domain Description: DUF4297 Location: 256225-256825 bp Feature: domain Description: DUF42 97 Location: 2 562 2 5-2 5682 5 bp Feature: domain Description: DUF1837 Location: 257080-257758 bp Feature: domain Description: DUF1837 Location: 2 57080-2 57758 bp Feature: gene Location: 258305-259540 bp Feature: gene Location: 259727-260902 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 260003-260630 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 60003-2 60630 bp Feature: gene Location: 260929-262122 bp Feature: gene Location: 262172-262444 bp Feature: gene Location: 281211-282017 bp Feature: domain Description: xerC Location: 281367-282003 bp Feature: domain Description: xerC Location: 2 81367-2 82 003 bp Feature: gene Location: 282610-282804 bp Feature: gene Location: 282839-284128 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 283085-283670 bp Feature: RT Description: RVT-G2 L4 Note: G2 L4 RT Location: 2 83085-2 83670 bp Feature: gene Location: 284233-284415 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 284263-284368 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 2 842 63-2 84368 bp Feature: gene Location: 284532-284993 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4297 (pfam14130), DUF1837 (pfam08878), RVT-Retrons, xerC (PRK01287), RVT-G2L4, CxxC_CXXC_SSSS (smart00834)