myRT

myRT report for GCA_900585565.1_p22.F4

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Seq: UTUE01000050.1 (679096 bp)
Overview 1 RT 1: 256198-262444 bp 2 RT 2: 281211-284993 bp Neighborhood of RT #1 [256198, 262444] DUF4297 DUF1837 RVT-Retrons Neighborhood of RT #2 [281211, 284993] xerC RVT-G2L4 CxxC_CXXC_SSSS Feature: gene Location: 256198-257814 bp Feature: domain Description: DUF4297 Location: 256225-256825 bp Feature: domain Description: DUF4297 Location: 256225-256825 bp Feature: domain Description: DUF1837 Location: 257080-257758 bp Feature: domain Description: DUF1 837 Location: 257080-257758 bp Feature: gene Location: 258305-259540 bp Feature: gene Location: 259727-260902 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 260003-260630 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 260003-260630 bp Feature: gene Location: 260929-262122 bp Feature: gene Location: 262172-262444 bp Feature: gene Location: 281211-282017 bp Feature: domain Description: xerC Location: 281367-282003 bp Feature: domain Description: xerC Location: 281 367-282003 bp Feature: gene Location: 282610-282804 bp Feature: gene Location: 282839-284128 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 283085-283670 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 283085-283670 bp Feature: gene Location: 284233-284415 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 284263-284368 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 284263-284368 bp Feature: gene Location: 284532-284993 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4297 (pfam14130), DUF1837 (pfam08878), RVT-Retrons, xerC (PRK01287), RVT-G2L4, CxxC_CXXC_SSSS (smart00834)

Seq: UTUE01000049.1 (95348 bp)
Overview 1 RT 1: 59881-68981 bp Neighborhood of RT #1 [59881, 68998] Integrase_1 BRR2 BRR2 RVT-UG5 COG3905 ParE Feature: gene Location: 59881-60861 bp Feature: domain Description: Integrase_1 Location: 60268-60703 bp Feature: domain Description: Integrase_1 Location: 602 68-60703 bp Feature: gene Location: 62246-64363 bp Feature: domain Description: BRR2 Location: 62498-62882 bp Feature: domain Description: BRR2 Location: 62 498-62 882 bp Feature: domain Description: BRR2 Location: 63152-63722 bp Feature: domain Description: BRR2 Location: 63152 -6372 2 bp Feature: gene Location: 64579-67815 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 65107-65590 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 65107-65590 bp Feature: gene Location: 68482-68745 bp Feature: domain Description: COG3905 Location: 68497-68704 bp Feature: domain Description: COG3905 Location: 68497-68704 bp Feature: gene Location: 68708-68998 bp Feature: domain Description: ParE Location: 68711-68981 bp Feature: domain Description: ParE Location: 68711-68981 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Integrase_1 (pfam12835), BRR2 (COG1204), RVT-UG5, COG3905 (Predicted transcriptional regulator ), ParE (COG3668)