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myRT report for GCA_900585695.1_p22.H4
Download annotations/find similar RTs
Seq:
UTUP01000045.1 (675626 bp)
Overview
1
RT 1: 252787-259033 bp
2
RT 2: 277800-281582 bp
Neighborhood of RT #1 [252787, 259033]
DUF4297
DUF1837
RVT-Retrons
Neighborhood of RT #2 [277800, 281582]
xerC
RVT-G2L4
CxxC_CXXC_SSSS
Feature: gene
Location: 252787-254403 bp
Feature: domain
Description: DUF4297
Location: 252814-253414 bp
Feature: domain
Description: DUF4297
Location: 25281 4-25341 4 bp
Feature: domain
Description: DUF1837
Location: 253669-254347 bp
Feature: domain
Description: DUF1 837
Location: 253669-254347 bp
Feature: gene
Location: 254894-256129 bp
Feature: gene
Location: 256316-257491 bp
Feature: RT
Description: RVT-Retrons
Note: Retrons RT
Location: 256592-257219 bp
Feature: RT
Description: RVT-Retrons
Note: Retrons RT
Location: 256592-25721 9 bp
Feature: gene
Location: 257518-258711 bp
Feature: gene
Location: 258761-259033 bp
Feature: gene
Location: 277800-278606 bp
Feature: domain
Description: xerC
Location: 277956-278592 bp
Feature: domain
Description: xerC
Location: 277956-278592 bp
Feature: gene
Location: 279199-279393 bp
Feature: gene
Location: 279428-280717 bp
Feature: RT
Description: RVT-G2L4
Note: G2L4 RT
Location: 279674-280259 bp
Feature: RT
Description: RVT-G2L4
Note: G2L4 RT
Location: 279674-280259 bp
Feature: gene
Location: 280822-281004 bp
Feature: domain
Description: CxxC_CXXC_SSSS
Location: 280852-280957 bp
Feature: domain
Description: CxxC_CXXC_SSSS
Location: 280852-280957 bp
Feature: gene
Location: 281121-281582 bp
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Associated domains:
myRT
DUF4297 (pfam14130)
,
DUF1837 (pfam08878)
,
RVT-Retrons
,
xerC (PRK01287)
,
RVT-G2L4
,
CxxC_CXXC_SSSS (smart00834)