myRT

myRT report for GCA_900586365.1_p24.A1

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Seq: UTXA01000005.1 (347516 bp)
Overview 1 RT 1: 223777-230023 bp 2 RT 2: 248790-252572 bp Neighborhood of RT #1 [223777, 230023] DUF4297 DUF1837 RVT-Retrons Neighborhood of RT #2 [248790, 252572] xerC RVT-G2L4 CxxC_CXXC_SSSS Feature: gene Location: 223777-225393 bp Feature: domain Description: DUF4297 Location: 223804-224404 bp Feature: domain Description: DUF4297 Location: 223804-224404 bp Feature: domain Description: DUF1837 Location: 224659-225337 bp Feature: domain Description: DUF1 837 Location: 224659-225337 bp Feature: gene Location: 225884-227119 bp Feature: gene Location: 227306-228481 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 227582-228209 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 227582-228209 bp Feature: gene Location: 228508-229701 bp Feature: gene Location: 229751-230023 bp Feature: gene Location: 248790-249596 bp Feature: domain Description: xerC Location: 248946-249582 bp Feature: domain Description: xerC Location: 248946-249582 bp Feature: gene Location: 250189-250383 bp Feature: gene Location: 250418-251707 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 250664-251249 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 250664-251 249 bp Feature: gene Location: 251812-251994 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 251842-251947 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 251 842-251 947 bp Feature: gene Location: 252111-252572 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4297 (pfam14130), DUF1837 (pfam08878), RVT-Retrons, xerC (PRK01287), RVT-G2L4, CxxC_CXXC_SSSS (smart00834)

Seq: UTXA01000076.1 (126636 bp)
Overview 1 RT 1: 3896-12855 bp Neighborhood of RT #1 [3896, 13013] ParE COG3905 RVT-UG5 BRR2 BRR2 Integrase_1 Feature: gene Location: 3896-4186 bp Feature: domain Description: ParE Location: 3899-4169 bp Feature: domain Description: ParE Location: 3899-4169 bp Feature: gene Location: 4149-4412 bp Feature: domain Description: COG3905 Location: 4164-4371 bp Feature: domain Description: COG3905 Location: 4164-4371 bp Feature: gene Location: 5079-8315 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 5607-6090 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 5607-6090 bp Feature: gene Location: 8531-10648 bp Feature: domain Description: BRR2 Location: 8783-9167 bp Feature: domain Description: BRR2 Location: 8783-9167 bp Feature: domain Description: BRR2 Location: 9437-10007 bp Feature: domain Description: BRR2 Location: 9437-10007 bp Feature: gene Location: 12033-13013 bp Feature: domain Description: Integrase_1 Location: 12420-12855 bp Feature: domain Description: Integrase_1 Location: 12 42 0-12 855 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ParE (COG3668), COG3905 (Predicted transcriptional regulator ), RVT-UG5, BRR2 (COG1204), Integrase_1 (pfam12835)