myRT

myRT report for GCA_900587295.1_p25.B3

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Seq: UUAP01000060.1 (325665 bp)
Overview 1 RT 1: 223631-229877 bp 2 RT 2: 248644-252426 bp Neighborhood of RT #1 [223631, 229877] DUF4297 DUF1837 RVT-Retrons Neighborhood of RT #2 [248644, 252426] xerC RVT-G2L4 CxxC_CXXC_SSSS Feature: gene Location: 223631-225247 bp Feature: domain Description: DUF4297 Location: 223658-224258 bp Feature: domain Description: DUF4297 Location: 223658-224258 bp Feature: domain Description: DUF1837 Location: 224513-225191 bp Feature: domain Description: DUF1 837 Location: 22451 3-2251 91 bp Feature: gene Location: 225738-226973 bp Feature: gene Location: 227160-228335 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 227436-228063 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 227436-228063 bp Feature: gene Location: 228362-229555 bp Feature: gene Location: 229605-229877 bp Feature: gene Location: 248644-249450 bp Feature: domain Description: xerC Location: 248800-249436 bp Feature: domain Description: xerC Location: 248800-249436 bp Feature: gene Location: 250043-250237 bp Feature: gene Location: 250272-251561 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 250518-251103 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 25051 8-251 1 03 bp Feature: gene Location: 251666-251848 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 251696-251801 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 251 696-251 801 bp Feature: gene Location: 251965-252426 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4297 (pfam14130), DUF1837 (pfam08878), RVT-Retrons, xerC (PRK01287), RVT-G2L4, CxxC_CXXC_SSSS (smart00834)

Seq: UUAP01000005.1 (382462 bp)
Overview 1 RT 1: 313327-322286 bp Neighborhood of RT #1 [313327, 322444] ParE COG3905 RVT-UG5 BRR2 BRR2 Integrase_1 Feature: gene Location: 313327-313617 bp Feature: domain Description: ParE Location: 313330-313600 bp Feature: domain Description: ParE Location: 313330-313600 bp Feature: gene Location: 313580-313843 bp Feature: domain Description: COG3905 Location: 313595-313802 bp Feature: domain Description: COG3905 Location: 313595-313802 bp Feature: gene Location: 314510-317746 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 315038-315521 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 315038-31552 1 bp Feature: gene Location: 317962-320079 bp Feature: domain Description: BRR2 Location: 318214-318598 bp Feature: domain Description: BRR2 Location: 3182 14-318598 bp Feature: domain Description: BRR2 Location: 318868-319438 bp Feature: domain Description: BRR2 Location: 318868-319438 bp Feature: gene Location: 321464-322444 bp Feature: domain Description: Integrase_1 Location: 321851-322286 bp Feature: domain Description: Integrase_1 Location: 32 1851-32 2 2 86 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ParE (COG3668), COG3905 (Predicted transcriptional regulator ), RVT-UG5, BRR2 (COG1204), Integrase_1 (pfam12835)