myRT

myRT report for GCA_900587525.1_p25.D3

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Seq: UUBS01000057.1 (381870 bp)
Overview 1 RT 1: 252820-259066 bp 2 RT 2: 277833-281615 bp Neighborhood of RT #1 [252820, 259066] DUF4297 DUF1837 RVT-Retrons Neighborhood of RT #2 [277833, 281615] xerC RVT-G2L4 CxxC_CXXC_SSSS Feature: gene Location: 252820-254436 bp Feature: domain Description: DUF4297 Location: 252847-253447 bp Feature: domain Description: DUF4297 Location: 252847-253447 bp Feature: domain Description: DUF1837 Location: 253702-254380 bp Feature: domain Description: DUF1 837 Location: 253702-254380 bp Feature: gene Location: 254927-256162 bp Feature: gene Location: 256349-257524 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 256625-257252 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 256625-257252 bp Feature: gene Location: 257551-258744 bp Feature: gene Location: 258794-259066 bp Feature: gene Location: 277833-278639 bp Feature: domain Description: xerC Location: 277989-278625 bp Feature: domain Description: xerC Location: 277989-278625 bp Feature: gene Location: 279232-279426 bp Feature: gene Location: 279461-280750 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 279707-280292 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 279707-280292 bp Feature: gene Location: 280855-281037 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 280885-280990 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 280885-280990 bp Feature: gene Location: 281154-281615 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4297 (pfam14130), DUF1837 (pfam08878), RVT-Retrons, xerC (PRK01287), RVT-G2L4, CxxC_CXXC_SSSS (smart00834)

Seq: UUBS01000037.1 (242208 bp)
Overview 1 RT 1: 173073-182032 bp Neighborhood of RT #1 [173073, 182190] ParE COG3905 RVT-UG5 BRR2 BRR2 Integrase_1 Feature: gene Location: 173073-173363 bp Feature: domain Description: ParE Location: 173076-173346 bp Feature: domain Description: ParE Location: 173076-173346 bp Feature: gene Location: 173326-173589 bp Feature: domain Description: COG3905 Location: 173341-173548 bp Feature: domain Description: COG3905 Location: 173341-173548 bp Feature: gene Location: 174256-177492 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 174784-175267 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 174784-1752 67 bp Feature: gene Location: 177708-179825 bp Feature: domain Description: BRR2 Location: 177960-178344 bp Feature: domain Description: BRR2 Location: 177960-178344 bp Feature: domain Description: BRR2 Location: 178614-179184 bp Feature: domain Description: BRR2 Location: 178614-179184 bp Feature: gene Location: 181210-182190 bp Feature: domain Description: Integrase_1 Location: 181597-182032 bp Feature: domain Description: Integrase_1 Location: 181597-182 032 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ParE (COG3668), COG3905 (Predicted transcriptional regulator ), RVT-UG5, BRR2 (COG1204), Integrase_1 (pfam12835)