myRT

myRT report for GCA_900587615.1_p25.E3

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Seq: UUBY01000001.1 (574873 bp)
Overview 1 RT 1: 100264-102858 bp 2 RT 2: 119573-129003 bp Neighborhood of RT #1 [100264, 102858] CxxC_CXXC_SSSS RVT-G2L4 Neighborhood of RT #2 [119573, 129059] TraI_2 TraI_2_C RVT-Retrons DUF4297 DUF1837 Feature: gene Location: 100264-100725 bp Feature: gene Location: 100842-101024 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 100872-100977 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 1 00872-1 00977 bp Feature: gene Location: 101129-102418 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 101375-101960 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 1 01 375-1 01 960 bp Feature: gene Location: 102453-102647 bp Feature: gene Location: 102727-102858 bp Feature: gene Location: 119573-121297 bp Feature: domain Description: TraI_2 Location: 119642-120578 bp Feature: domain Description: TraI_2 Location: 1 1 9642-1 20578 bp Feature: domain Description: TraI_2_C Location: 120923-121283 bp Feature: domain Description: TraI_2_C Location: 1 20923-1 21 283 bp Feature: gene Location: 123135-124328 bp Feature: gene Location: 124355-125530 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 124631-125258 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 24631 -1 25258 bp Feature: gene Location: 125717-126952 bp Feature: gene Location: 127443-129059 bp Feature: domain Description: DUF4297 Location: 127470-128070 bp Feature: domain Description: DUF4297 Location: 1 27470-1 28070 bp Feature: domain Description: DUF1837 Location: 128325-129003 bp Feature: domain Description: DUF1 837 Location: 1 28325-1 29003 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CxxC_CXXC_SSSS (smart00834), RVT-G2L4, TraI_2 (pfam07514), TraI_2_C (pfam07515), RVT-Retrons, DUF4297 (pfam14130), DUF1837 (pfam08878)

Seq: UUBY01000004.1 (436076 bp)
Overview 1 RT 1: 313336-322295 bp Neighborhood of RT #1 [313336, 322453] ParE COG3905 RVT-UG5 BRR2 BRR2 Integrase_1 Feature: gene Location: 313336-313626 bp Feature: domain Description: ParE Location: 313339-313609 bp Feature: domain Description: ParE Location: 313339-313609 bp Feature: gene Location: 313589-313852 bp Feature: domain Description: COG3905 Location: 313604-313811 bp Feature: domain Description: COG3905 Location: 313604-313811 bp Feature: gene Location: 314519-317755 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 315047-315530 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 315047-315530 bp Feature: gene Location: 317971-320088 bp Feature: domain Description: BRR2 Location: 318223-318607 bp Feature: domain Description: BRR2 Location: 3182 2 3-318607 bp Feature: domain Description: BRR2 Location: 318877-319447 bp Feature: domain Description: BRR2 Location: 318877-319447 bp Feature: gene Location: 321473-322453 bp Feature: domain Description: Integrase_1 Location: 321860-322295 bp Feature: domain Description: Integrase_1 Location: 32 1860-32 2 2 95 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ParE (COG3668), COG3905 (Predicted transcriptional regulator ), RVT-UG5, BRR2 (COG1204), Integrase_1 (pfam12835)