myRT

myRT report for GCA_900587625.1_p25.E2

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Seq: UUCC01000001.1 (562550 bp)
Overview 1 RT 1: 210789-219889 bp Neighborhood of RT #1 [210789, 219906] Integrase_1 BRR2 BRR2 RVT-UG5 COG3905 ParE Feature: gene Location: 210789-211769 bp Feature: domain Description: Integrase_1 Location: 211176-211611 bp Feature: domain Description: Integrase_1 Location: 21 1 1 76-21 1 61 1 bp Feature: gene Location: 213154-215271 bp Feature: domain Description: BRR2 Location: 213406-213790 bp Feature: domain Description: BRR2 Location: 21 3406-21 3790 bp Feature: domain Description: BRR2 Location: 214060-214630 bp Feature: domain Description: BRR2 Location: 21 4060-21 4630 bp Feature: gene Location: 215487-218723 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 216015-216498 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 21 601 5-21 6498 bp Feature: gene Location: 219390-219653 bp Feature: domain Description: COG3905 Location: 219405-219612 bp Feature: domain Description: COG3905 Location: 21 9405-21 961 2 bp Feature: gene Location: 219616-219906 bp Feature: domain Description: ParE Location: 219619-219889 bp Feature: domain Description: ParE Location: 21 961 9-21 9889 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Integrase_1 (pfam12835), BRR2 (COG1204), RVT-UG5, COG3905 (Predicted transcriptional regulator ), ParE (COG3668)

Seq: UUCC01000004.1 (379942 bp)
Overview 1 RT 1: 94950-97544 bp 2 RT 2: 116871-123689 bp Neighborhood of RT #1 [94950, 97544] CxxC_CXXC_SSSS RVT-G2L4 Neighborhood of RT #2 [116871, 123745] RVT-Retrons DUF4297 DUF1837 Feature: gene Location: 94950-95411 bp Feature: gene Location: 95528-95710 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 95558-95663 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 95558-95663 bp Feature: gene Location: 95815-97077 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 96034-96619 bp Feature: RT Description: RVT-G2 L4 Note: G2 L4 RT Location: 96034-96619 bp Feature: gene Location: 97139-97333 bp Feature: gene Location: 97413-97544 bp Feature: gene Location: 116871-117542 bp Feature: gene Location: 117821-119014 bp Feature: gene Location: 119041-120216 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 119317-119944 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 119317-119944 bp Feature: gene Location: 120403-121638 bp Feature: gene Location: 122129-123745 bp Feature: domain Description: DUF4297 Location: 122156-122756 bp Feature: domain Description: DUF42 97 Location: 12 2 156-12 2 756 bp Feature: domain Description: DUF1837 Location: 123011-123689 bp Feature: domain Description: DUF1837 Location: 12 3011-12 3689 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CxxC_CXXC_SSSS (smart00834), RVT-G2L4, RVT-Retrons, DUF4297 (pfam14130), DUF1837 (pfam08878)