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myRT report for GCA_900587955.1_p25.H3
Download annotations/find similar RTs
Seq:
UUDF01000004.1 (490858 bp)
Overview
1
RT 1: 223649-229895 bp
2
RT 2: 248662-252444 bp
Neighborhood of RT #1 [223649, 229895]
DUF4297
DUF1837
RVT-Retrons
Neighborhood of RT #2 [248662, 252444]
xerC
RVT-G2L4
CxxC_CXXC_SSSS
Feature: gene
Location: 223649-225265 bp
Feature: domain
Description: DUF4297
Location: 223676-224276 bp
Feature: domain
Description: DUF4297
Location: 223676-224276 bp
Feature: domain
Description: DUF1837
Location: 224531-225209 bp
Feature: domain
Description: DUF1 837
Location: 224531 -225209 bp
Feature: gene
Location: 225756-226991 bp
Feature: gene
Location: 227178-228353 bp
Feature: RT
Description: RVT-Retrons
Note: Retrons RT
Location: 227454-228081 bp
Feature: RT
Description: RVT-Retrons
Note: Retrons RT
Location: 227454-228081 bp
Feature: gene
Location: 228380-229573 bp
Feature: gene
Location: 229623-229895 bp
Feature: gene
Location: 248662-249468 bp
Feature: domain
Description: xerC
Location: 248818-249454 bp
Feature: domain
Description: xerC
Location: 24881 8-249454 bp
Feature: gene
Location: 250061-250255 bp
Feature: gene
Location: 250290-251579 bp
Feature: RT
Description: RVT-G2L4
Note: G2L4 RT
Location: 250536-251121 bp
Feature: RT
Description: RVT-G2L4
Note: G2L4 RT
Location: 250536-251 1 21 bp
Feature: gene
Location: 251684-251866 bp
Feature: domain
Description: CxxC_CXXC_SSSS
Location: 251714-251819 bp
Feature: domain
Description: CxxC_CXXC_SSSS
Location: 251 71 4-251 81 9 bp
Feature: gene
Location: 251983-252444 bp
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Associated domains:
myRT
DUF4297 (pfam14130)
,
DUF1837 (pfam08878)
,
RVT-Retrons
,
xerC (PRK01287)
,
RVT-G2L4
,
CxxC_CXXC_SSSS (smart00834)