myRT

myRT report for GCA_900588075.1_p26.A7

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Seq: UUDQ01000058.1 (446807 bp)
Overview 1 RT 1: 179613-185859 bp 2 RT 2: 204626-208408 bp Neighborhood of RT #1 [179613, 185859] DUF4297 DUF1837 RVT-Retrons Neighborhood of RT #2 [204626, 208408] xerC RVT-G2L4 CxxC_CXXC_SSSS Feature: gene Location: 179613-181229 bp Feature: domain Description: DUF4297 Location: 179640-180240 bp Feature: domain Description: DUF4297 Location: 1 79640-1 80240 bp Feature: domain Description: DUF1837 Location: 180495-181173 bp Feature: domain Description: DUF1 837 Location: 1 80495-1 81 1 73 bp Feature: gene Location: 181720-182955 bp Feature: gene Location: 183142-184317 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 183418-184045 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 8341 8-1 84045 bp Feature: gene Location: 184344-185537 bp Feature: gene Location: 185587-185859 bp Feature: gene Location: 204626-205432 bp Feature: domain Description: xerC Location: 204782-205418 bp Feature: domain Description: xerC Location: 204782-20541 8 bp Feature: gene Location: 206025-206219 bp Feature: gene Location: 206254-207543 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 206500-207085 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 206500-207085 bp Feature: gene Location: 207648-207830 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 207678-207783 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 207678-207783 bp Feature: gene Location: 207947-208408 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4297 (pfam14130), DUF1837 (pfam08878), RVT-Retrons, xerC (PRK01287), RVT-G2L4, CxxC_CXXC_SSSS (smart00834)

Seq: UUDQ01000013.1 (126581 bp)
Overview 1 RT 1: 3841-12800 bp Neighborhood of RT #1 [3841, 12958] ParE COG3905 RVT-UG5 BRR2 BRR2 Integrase_1 Feature: gene Location: 3841-4131 bp Feature: domain Description: ParE Location: 3844-4114 bp Feature: domain Description: ParE Location: 3844-4114 bp Feature: gene Location: 4094-4357 bp Feature: domain Description: COG3905 Location: 4109-4316 bp Feature: domain Description: COG3905 Location: 4109-4316 bp Feature: gene Location: 5024-8260 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 5552-6035 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 5552 -6035 bp Feature: gene Location: 8476-10593 bp Feature: domain Description: BRR2 Location: 8728-9112 bp Feature: domain Description: BRR2 Location: 872 8-9112 bp Feature: domain Description: BRR2 Location: 9382-9952 bp Feature: domain Description: BRR2 Location: 9382 -9952 bp Feature: gene Location: 11978-12958 bp Feature: domain Description: Integrase_1 Location: 12365-12800 bp Feature: domain Description: Integrase_1 Location: 12 365-12 800 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ParE (COG3668), COG3905 (Predicted transcriptional regulator ), RVT-UG5, BRR2 (COG1204), Integrase_1 (pfam12835)