myRT

myRT report for GCA_900588175.1_p26.B6

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Seq: UUEA01000058.1 (126786 bp)
Overview 1 RT 1: 113624-122724 bp Neighborhood of RT #1 [113624, 122741] Integrase_1 BRR2 BRR2 RVT-UG5 COG3905 ParE Feature: gene Location: 113624-114604 bp Feature: domain Description: Integrase_1 Location: 114011-114446 bp Feature: domain Description: Integrase_1 Location: 1 1 401 1 -1 1 4446 bp Feature: gene Location: 115989-118106 bp Feature: domain Description: BRR2 Location: 116241-116625 bp Feature: domain Description: BRR2 Location: 1 1 6241 -1 1 6625 bp Feature: domain Description: BRR2 Location: 116895-117465 bp Feature: domain Description: BRR2 Location: 1 1 6895-1 1 7465 bp Feature: gene Location: 118322-121558 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 118850-119333 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1 1 8850-1 1 9333 bp Feature: gene Location: 122225-122488 bp Feature: domain Description: COG3905 Location: 122240-122447 bp Feature: domain Description: COG3905 Location: 1 22240-1 22447 bp Feature: gene Location: 122451-122741 bp Feature: domain Description: ParE Location: 122454-122724 bp Feature: domain Description: ParE Location: 1 22454-1 22724 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Integrase_1 (pfam12835), BRR2 (COG1204), RVT-UG5, COG3905 (Predicted transcriptional regulator ), ParE (COG3668)

Seq: UUEA01000059.1 (379468 bp)
Overview 1 RT 1: 94961-98754 bp 2 RT 2: 116397-123215 bp Neighborhood of RT #1 [94961, 98789] CxxC_CXXC_SSSS RVT-G2L4 xerC ICE_RAQPRD Neighborhood of RT #2 [116397, 123271] RVT-Retrons DUF4297 DUF1837 Feature: gene Location: 94961-95422 bp Feature: gene Location: 95539-95721 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 95569-95674 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 95569-95674 bp Feature: gene Location: 95826-97088 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 96045-96630 bp Feature: RT Description: RVT-G2 L4 Note: G2 L4 RT Location: 96045-96630 bp Feature: gene Location: 97452-98258 bp Feature: domain Description: xerC Location: 97608-98244 bp Feature: domain Description: xerC Location: 97608-982 44 bp Feature: gene Location: 98454-98789 bp Feature: domain Description: ICE_RAQPRD Location: 98484-98754 bp Feature: domain Description: ICE_RAQPRD Location: 98484-98754 bp Feature: gene Location: 116397-117068 bp Feature: gene Location: 117347-118540 bp Feature: gene Location: 118567-119742 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 118843-119470 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 118843-119470 bp Feature: gene Location: 119929-121164 bp Feature: gene Location: 121655-123271 bp Feature: domain Description: DUF4297 Location: 121682-122282 bp Feature: domain Description: DUF42 97 Location: 12 1682 -12 2 2 82 bp Feature: domain Description: DUF1837 Location: 122537-123215 bp Feature: domain Description: DUF1837 Location: 12 2 537-12 32 15 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CxxC_CXXC_SSSS (smart00834), RVT-G2L4, xerC (PRK01287), ICE_RAQPRD (TIGR01690), RVT-Retrons, DUF4297 (pfam14130), DUF1837 (pfam08878)