myRT

myRT report for GCA_900588215.1_p26.C4

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Seq: UUEF01000052.1 (490848 bp)
Overview 1 RT 1: 223690-229936 bp 2 RT 2: 248703-252485 bp Neighborhood of RT #1 [223690, 229936] DUF4297 DUF1837 RVT-Retrons Neighborhood of RT #2 [248703, 252485] xerC RVT-G2L4 CxxC_CXXC_SSSS Feature: gene Location: 223690-225306 bp Feature: domain Description: DUF4297 Location: 223717-224317 bp Feature: domain Description: DUF4297 Location: 22371 7-22431 7 bp Feature: domain Description: DUF1837 Location: 224572-225250 bp Feature: domain Description: DUF1 837 Location: 224572-225250 bp Feature: gene Location: 225797-227032 bp Feature: gene Location: 227219-228394 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 227495-228122 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 227495-2281 22 bp Feature: gene Location: 228421-229614 bp Feature: gene Location: 229664-229936 bp Feature: gene Location: 248703-249509 bp Feature: domain Description: xerC Location: 248859-249495 bp Feature: domain Description: xerC Location: 248859-249495 bp Feature: gene Location: 250102-250296 bp Feature: gene Location: 250331-251620 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 250577-251162 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 250577-251 1 62 bp Feature: gene Location: 251725-251907 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 251755-251860 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 251 755-251 860 bp Feature: gene Location: 252024-252485 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4297 (pfam14130), DUF1837 (pfam08878), RVT-Retrons, xerC (PRK01287), RVT-G2L4, CxxC_CXXC_SSSS (smart00834)

Seq: UUEF01000001.1 (562532 bp)
Overview 1 RT 1: 342640-351599 bp Neighborhood of RT #1 [342640, 351757] ParE COG3905 RVT-UG5 BRR2 BRR2 Integrase_1 Feature: gene Location: 342640-342930 bp Feature: domain Description: ParE Location: 342643-342913 bp Feature: domain Description: ParE Location: 342 643-342 913 bp Feature: gene Location: 342893-343156 bp Feature: domain Description: COG3905 Location: 342908-343115 bp Feature: domain Description: COG3905 Location: 342 908-343115 bp Feature: gene Location: 343823-347059 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 344351-344834 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 344351-344834 bp Feature: gene Location: 347275-349392 bp Feature: domain Description: BRR2 Location: 347527-347911 bp Feature: domain Description: BRR2 Location: 34752 7-347911 bp Feature: domain Description: BRR2 Location: 348181-348751 bp Feature: domain Description: BRR2 Location: 348181-348751 bp Feature: gene Location: 350777-351757 bp Feature: domain Description: Integrase_1 Location: 351164-351599 bp Feature: domain Description: Integrase_1 Location: 351164-351599 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ParE (COG3668), COG3905 (Predicted transcriptional regulator ), RVT-UG5, BRR2 (COG1204), Integrase_1 (pfam12835)