myRT

myRT report for GCA_900588305.1_p26.D4

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Seq: UUEQ01000055.1 (411492 bp)
Overview 1 RT 1: 342523-351482 bp Neighborhood of RT #1 [342523, 351640] ParE COG3905 RVT-UG5 BRR2 BRR2 Integrase_1 Feature: gene Location: 342523-342813 bp Feature: domain Description: ParE Location: 342526-342796 bp Feature: domain Description: ParE Location: 342526-342796 bp Feature: gene Location: 342776-343039 bp Feature: domain Description: COG3905 Location: 342791-342998 bp Feature: domain Description: COG3905 Location: 342791 -342998 bp Feature: gene Location: 343706-346942 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 344234-344717 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 344234-34471 7 bp Feature: gene Location: 347158-349275 bp Feature: domain Description: BRR2 Location: 347410-347794 bp Feature: domain Description: BRR2 Location: 34741 0-347794 bp Feature: domain Description: BRR2 Location: 348064-348634 bp Feature: domain Description: BRR2 Location: 348064-348634 bp Feature: gene Location: 350660-351640 bp Feature: domain Description: Integrase_1 Location: 351047-351482 bp Feature: domain Description: Integrase_1 Location: 351 047-351 482 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ParE (COG3668), COG3905 (Predicted transcriptional regulator ), RVT-UG5, BRR2 (COG1204), Integrase_1 (pfam12835)

Seq: UUEQ01000004.1 (381837 bp)
Overview 1 RT 1: 100251-102845 bp 2 RT 2: 122172-128990 bp Neighborhood of RT #1 [100251, 102845] CxxC_CXXC_SSSS RVT-G2L4 Neighborhood of RT #2 [122172, 129046] RVT-Retrons DUF4297 DUF1837 Feature: gene Location: 100251-100712 bp Feature: gene Location: 100829-101011 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 100859-100964 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 100859-100964 bp Feature: gene Location: 101116-102378 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 101335-101920 bp Feature: RT Description: RVT-G2 L4 Note: G2 L4 RT Location: 101335-10192 0 bp Feature: gene Location: 102440-102634 bp Feature: gene Location: 102714-102845 bp Feature: gene Location: 122172-122843 bp Feature: gene Location: 123122-124315 bp Feature: gene Location: 124342-125517 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 124618-125245 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12 4618-12 52 45 bp Feature: gene Location: 125704-126939 bp Feature: gene Location: 127430-129046 bp Feature: domain Description: DUF4297 Location: 127457-128057 bp Feature: domain Description: DUF42 97 Location: 12 7457-12 8057 bp Feature: domain Description: DUF1837 Location: 128312-128990 bp Feature: domain Description: DUF1837 Location: 12 8312 -12 8990 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CxxC_CXXC_SSSS (smart00834), RVT-G2L4, RVT-Retrons, DUF4297 (pfam14130), DUF1837 (pfam08878)