myRT

myRT report for GCA_900588335.1_p26.D5

Download annotations/find similar RTs

Seq: UUEP01000001.1 (562415 bp)
Overview 1 RT 1: 210776-219876 bp Neighborhood of RT #1 [210776, 219893] Integrase_1 BRR2 BRR2 RVT-UG5 COG3905 ParE Feature: gene Location: 210776-211756 bp Feature: domain Description: Integrase_1 Location: 211163-211598 bp Feature: domain Description: Integrase_1 Location: 21 1 1 63-21 1 598 bp Feature: gene Location: 213141-215258 bp Feature: domain Description: BRR2 Location: 213393-213777 bp Feature: domain Description: BRR2 Location: 21 3393-21 3777 bp Feature: domain Description: BRR2 Location: 214047-214617 bp Feature: domain Description: BRR2 Location: 21 4047-21 461 7 bp Feature: gene Location: 215474-218710 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 216002-216485 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 21 6002-21 6485 bp Feature: gene Location: 219377-219640 bp Feature: domain Description: COG3905 Location: 219392-219599 bp Feature: domain Description: COG3905 Location: 21 9392-21 9599 bp Feature: gene Location: 219603-219893 bp Feature: domain Description: ParE Location: 219606-219876 bp Feature: domain Description: ParE Location: 21 9606-21 9876 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Integrase_1 (pfam12835), BRR2 (COG1204), RVT-UG5, COG3905 (Predicted transcriptional regulator ), ParE (COG3668)

Seq: UUEP01000039.1 (160596 bp)
Overview 1 RT 1: 100246-102840 bp 2 RT 2: 121867-128985 bp Neighborhood of RT #1 [100246, 102840] CxxC_CXXC_SSSS RVT-G2L4 Neighborhood of RT #2 [121867, 129041] HEPN_MAE_28990 RVT-Retrons DUF4297 DUF1837 Feature: gene Location: 100246-100707 bp Feature: gene Location: 100824-101006 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 100854-100959 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 100854-100959 bp Feature: gene Location: 101111-102400 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 101357-101942 bp Feature: RT Description: RVT-G2 L4 Note: G2 L4 RT Location: 101357-101942 bp Feature: gene Location: 102435-102629 bp Feature: gene Location: 102709-102840 bp Feature: gene Location: 121867-122838 bp Feature: domain Description: HEPN_MAE_28990 Location: 122011-122260 bp Feature: domain Description: HEPN_MAE_2 8990 Location: 12 2 011-12 2 2 60 bp Feature: gene Location: 123117-124310 bp Feature: gene Location: 124337-125512 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 124613-125240 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12 4613-12 52 40 bp Feature: gene Location: 125699-126934 bp Feature: gene Location: 127425-129041 bp Feature: domain Description: DUF4297 Location: 127452-128052 bp Feature: domain Description: DUF42 97 Location: 12 7452 -12 8052 bp Feature: domain Description: DUF1837 Location: 128307-128985 bp Feature: domain Description: DUF1837 Location: 12 8307-12 8985 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CxxC_CXXC_SSSS (smart00834), RVT-G2L4, HEPN_MAE_28990 (pfam18737), RVT-Retrons, DUF4297 (pfam14130), DUF1837 (pfam08878)