myRT

myRT report for GCA_900588415.1_p26.E5

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Seq: UUEZ01000057.1 (562454 bp)
Overview 1 RT 1: 210815-219915 bp Neighborhood of RT #1 [210815, 219932] Integrase_1 BRR2 BRR2 RVT-UG5 COG3905 ParE Feature: gene Location: 210815-211795 bp Feature: domain Description: Integrase_1 Location: 211202-211637 bp Feature: domain Description: Integrase_1 Location: 21 1 202-21 1 637 bp Feature: gene Location: 213180-215297 bp Feature: domain Description: BRR2 Location: 213432-213816 bp Feature: domain Description: BRR2 Location: 21 3432-21 381 6 bp Feature: domain Description: BRR2 Location: 214086-214656 bp Feature: domain Description: BRR2 Location: 21 4086-21 4656 bp Feature: gene Location: 215513-218749 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 216041-216524 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 21 6041 -21 6524 bp Feature: gene Location: 219416-219679 bp Feature: domain Description: COG3905 Location: 219431-219638 bp Feature: domain Description: COG3905 Location: 21 9431 -21 9638 bp Feature: gene Location: 219642-219932 bp Feature: domain Description: ParE Location: 219645-219915 bp Feature: domain Description: ParE Location: 21 9645-21 991 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Integrase_1 (pfam12835), BRR2 (COG1204), RVT-UG5, COG3905 (Predicted transcriptional regulator ), ParE (COG3668)

Seq: UUEZ01000001.1 (574714 bp)
Overview 1 RT 1: 445815-452061 bp 2 RT 2: 470828-474610 bp Neighborhood of RT #1 [445815, 452061] DUF4297 DUF1837 RVT-Retrons Neighborhood of RT #2 [470828, 474610] xerC RVT-G2L4 CxxC_CXXC_SSSS Feature: gene Location: 445815-447431 bp Feature: domain Description: DUF4297 Location: 445842-446442 bp Feature: domain Description: DUF42 97 Location: 445842 -446442 bp Feature: domain Description: DUF1837 Location: 446697-447375 bp Feature: domain Description: DUF1837 Location: 446697-447375 bp Feature: gene Location: 447922-449157 bp Feature: gene Location: 449344-450519 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 449620-450247 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 44962 0-4502 47 bp Feature: gene Location: 450546-451739 bp Feature: gene Location: 451789-452061 bp Feature: gene Location: 470828-471634 bp Feature: domain Description: xerC Location: 470984-471620 bp Feature: domain Description: xerC Location: 470984-47162 0 bp Feature: gene Location: 472227-472421 bp Feature: gene Location: 472456-473745 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 472702-473287 bp Feature: RT Description: RVT-G2 L4 Note: G2 L4 RT Location: 472 702 -4732 87 bp Feature: gene Location: 473850-474032 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 473880-473985 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 473880-473985 bp Feature: gene Location: 474149-474610 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4297 (pfam14130), DUF1837 (pfam08878), RVT-Retrons, xerC (PRK01287), RVT-G2L4, CxxC_CXXC_SSSS (smart00834)