myRT

myRT report for GCA_900588605.1_p26.G4

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Seq: UUFQ01000009.1 (73130 bp)
Overview 1 RT 1: 3995-11572 bp Neighborhood of RT #1 [3995, 11682] ParE COG3905 RVT-UG5 BRR2 BRR2 DUF1837 Feature: gene Location: 3995-4285 bp Feature: domain Description: ParE Location: 3998-4268 bp Feature: domain Description: ParE Location: 3998-4268 bp Feature: gene Location: 4248-4511 bp Feature: domain Description: COG3905 Location: 4263-4470 bp Feature: domain Description: COG3905 Location: 4263-4470 bp Feature: gene Location: 5178-8414 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 5706-6189 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 5706-61 89 bp Feature: gene Location: 8630-10747 bp Feature: domain Description: BRR2 Location: 8882-9266 bp Feature: domain Description: BRR2 Location: 8882-9266 bp Feature: domain Description: BRR2 Location: 9536-10106 bp Feature: domain Description: BRR2 Location: 9536-1 01 06 bp Feature: gene Location: 10717-11682 bp Feature: domain Description: DUF1837 Location: 10849-11572 bp Feature: domain Description: DUF1 837 Location: 1 0849-1 1 572 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ParE (COG3668), COG3905 (Predicted transcriptional regulator ), RVT-UG5, BRR2 (COG1204), DUF1837 (pfam08878)

Seq: UUFQ01000058.1 (352712 bp)
Overview 1 RT 1: 223668-229914 bp 2 RT 2: 248681-252463 bp Neighborhood of RT #1 [223668, 229914] DUF4297 DUF1837 RVT-Retrons Neighborhood of RT #2 [248681, 252463] xerC RVT-G2L4 CxxC_CXXC_SSSS Feature: gene Location: 223668-225284 bp Feature: domain Description: DUF4297 Location: 223695-224295 bp Feature: domain Description: DUF42 97 Location: 2 2 3695-2 2 42 95 bp Feature: domain Description: DUF1837 Location: 224550-225228 bp Feature: domain Description: DUF1837 Location: 2 2 4550-2 2 52 2 8 bp Feature: gene Location: 225775-227010 bp Feature: gene Location: 227197-228372 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 227473-228100 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 2 7473-2 2 8100 bp Feature: gene Location: 228399-229592 bp Feature: gene Location: 229642-229914 bp Feature: gene Location: 248681-249487 bp Feature: domain Description: xerC Location: 248837-249473 bp Feature: domain Description: xerC Location: 2 48837-2 49473 bp Feature: gene Location: 250080-250274 bp Feature: gene Location: 250309-251598 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 250555-251140 bp Feature: RT Description: RVT-G2 L4 Note: G2 L4 RT Location: 2 50555-2 51140 bp Feature: gene Location: 251703-251885 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 251733-251838 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 2 51733-2 51838 bp Feature: gene Location: 252002-252463 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4297 (pfam14130), DUF1837 (pfam08878), RVT-Retrons, xerC (PRK01287), RVT-G2L4, CxxC_CXXC_SSSS (smart00834)