myRT

myRT report for GCA_900588625.1_p26.G5

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Seq: UUFV01000001.1 (976285 bp)
Overview 1 RT 1: 26186-35145 bp 2 RT 2: 694685-697279 bp 3 RT 3: 713994-723424 bp Neighborhood of RT #1 [26186, 35303] ParE COG3905 RVT-UG5 BRR2 BRR2 Integrase_1 Neighborhood of RT #2 [694685, 697279] CxxC_CXXC_SSSS RVT-G2L4 Neighborhood of RT #3 [713994, 723480] TraI_2 TraI_2_C RVT-Retrons DUF4297 DUF1837 Feature: gene Location: 26186-26476 bp Feature: domain Description: ParE Location: 26189-26459 bp Feature: domain Description: ParE Location: 261 89-26459 bp Feature: gene Location: 26439-26702 bp Feature: domain Description: COG3905 Location: 26454-26661 bp Feature: domain Description: COG3905 Location: 26454-26661 bp Feature: gene Location: 27369-30605 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 27897-28380 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 27897-28380 bp Feature: gene Location: 30821-32938 bp Feature: domain Description: BRR2 Location: 31073-31457 bp Feature: domain Description: BRR2 Location: 31 073-31 457 bp Feature: domain Description: BRR2 Location: 31727-32297 bp Feature: domain Description: BRR2 Location: 31 727-32297 bp Feature: gene Location: 34323-35303 bp Feature: domain Description: Integrase_1 Location: 34710-35145 bp Feature: domain Description: Integrase_1 Location: 3471 0-351 45 bp Feature: gene Location: 694685-695146 bp Feature: gene Location: 695263-695445 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 695293-695398 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 695293-695398 bp Feature: gene Location: 695550-696839 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 695796-696381 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 695796-696381 bp Feature: gene Location: 696874-697068 bp Feature: gene Location: 697148-697279 bp Feature: gene Location: 713994-715718 bp Feature: domain Description: TraI_2 Location: 714063-714999 bp Feature: domain Description: TraI_2 Location: 71 4063-71 4999 bp Feature: domain Description: TraI_2_C Location: 715344-715704 bp Feature: domain Description: TraI_2_C Location: 71 5344-71 5704 bp Feature: gene Location: 717556-718749 bp Feature: gene Location: 718776-719951 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 719052-719679 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 71 9052-71 9679 bp Feature: gene Location: 720138-721373 bp Feature: gene Location: 721864-723480 bp Feature: domain Description: DUF4297 Location: 721891-722491 bp Feature: domain Description: DUF4297 Location: 721 891 -722491 bp Feature: domain Description: DUF1837 Location: 722746-723424 bp Feature: domain Description: DUF1 837 Location: 722746-723424 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ParE (COG3668), COG3905 (Predicted transcriptional regulator ), RVT-UG5, BRR2 (COG1204), Integrase_1 (pfam12835), CxxC_CXXC_SSSS (smart00834), RVT-G2L4, TraI_2 (pfam07514), TraI_2_C (pfam07515), RVT-Retrons
DUF4297 (pfam14130), DUF1837 (pfam08878)