myRT

myRT report for GCA_900589495.1_p2.E8

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Seq: UUJC01000001.1 (520007 bp)
Overview 1 RT 1: 238400-240994 bp 2 RT 2: 257709-267139 bp Neighborhood of RT #1 [238400, 240994] CxxC_CXXC_SSSS RVT-G2L4 Neighborhood of RT #2 [257709, 267195] TraI_2 TraI_2_C RVT-Retrons DUF4297 DUF1837 Feature: gene Location: 238400-238861 bp Feature: gene Location: 238978-239160 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 239008-239113 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 239008-2391 1 3 bp Feature: gene Location: 239265-240554 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 239511-240096 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 23951 1 -240096 bp Feature: gene Location: 240589-240783 bp Feature: gene Location: 240863-240994 bp Feature: gene Location: 257709-259433 bp Feature: domain Description: TraI_2 Location: 257778-258714 bp Feature: domain Description: TraI_2 Location: 257778-25871 4 bp Feature: domain Description: TraI_2_C Location: 259059-259419 bp Feature: domain Description: TraI_2_C Location: 259059-25941 9 bp Feature: gene Location: 261271-262464 bp Feature: gene Location: 262491-263666 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 262767-263394 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 262767-263394 bp Feature: gene Location: 263853-265088 bp Feature: gene Location: 265579-267195 bp Feature: domain Description: DUF4297 Location: 265606-266206 bp Feature: domain Description: DUF4297 Location: 265606-266206 bp Feature: domain Description: DUF1837 Location: 266461-267139 bp Feature: domain Description: DUF1 837 Location: 266461 -2671 39 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CxxC_CXXC_SSSS (smart00834), RVT-G2L4, TraI_2 (pfam07514), TraI_2_C (pfam07515), RVT-Retrons, DUF4297 (pfam14130), DUF1837 (pfam08878)

Seq: UUJC01000038.1 (94767 bp)
Overview 1 RT 1: 59469-68569 bp Neighborhood of RT #1 [59469, 68586] Integrase_1 BRR2 BRR2 RVT-UG5 COG3905 ParE Feature: gene Location: 59469-60449 bp Feature: domain Description: Integrase_1 Location: 59856-60291 bp Feature: domain Description: Integrase_1 Location: 59856-602 91 bp Feature: gene Location: 61834-63951 bp Feature: domain Description: BRR2 Location: 62086-62470 bp Feature: domain Description: BRR2 Location: 62 086-62 470 bp Feature: domain Description: BRR2 Location: 62740-63310 bp Feature: domain Description: BRR2 Location: 62 740-63310 bp Feature: gene Location: 64167-67403 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 64695-65178 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 64695-65178 bp Feature: gene Location: 68070-68333 bp Feature: domain Description: COG3905 Location: 68085-68292 bp Feature: domain Description: COG3905 Location: 68085-682 92 bp Feature: gene Location: 68296-68586 bp Feature: domain Description: ParE Location: 68299-68569 bp Feature: domain Description: ParE Location: 682 99-68569 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Integrase_1 (pfam12835), BRR2 (COG1204), RVT-UG5, COG3905 (Predicted transcriptional regulator ), ParE (COG3668)