myRT

myRT report for GCA_900589515.1_p2.E9

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Seq: UUJE01000019.1 (312575 bp)
Overview 1 RT 1: 92644-101603 bp Neighborhood of RT #1 [92644, 101761] ParE COG3905 RVT-UG5 BRR2 BRR2 Integrase_1 Feature: gene Location: 92644-92934 bp Feature: domain Description: ParE Location: 92647-92917 bp Feature: domain Description: ParE Location: 92647-9291 7 bp Feature: gene Location: 92897-93160 bp Feature: domain Description: COG3905 Location: 92912-93119 bp Feature: domain Description: COG3905 Location: 9291 2-931 1 9 bp Feature: gene Location: 93827-97063 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 94355-94838 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 94355-94838 bp Feature: gene Location: 97279-99396 bp Feature: domain Description: BRR2 Location: 97531-97915 bp Feature: domain Description: BRR2 Location: 97531 -9791 5 bp Feature: domain Description: BRR2 Location: 98185-98755 bp Feature: domain Description: BRR2 Location: 981 85-98755 bp Feature: gene Location: 100781-101761 bp Feature: domain Description: Integrase_1 Location: 101168-101603 bp Feature: domain Description: Integrase_1 Location: 1 01 1 68-1 01 603 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ParE (COG3668), COG3905 (Predicted transcriptional regulator ), RVT-UG5, BRR2 (COG1204), Integrase_1 (pfam12835)

Seq: UUJE01000021.1 (379944 bp)
Overview 1 RT 1: 256187-262433 bp 2 RT 2: 281200-284982 bp Neighborhood of RT #1 [256187, 262433] DUF4297 DUF1837 RVT-Retrons Neighborhood of RT #2 [281200, 284982] xerC RVT-G2L4 CxxC_CXXC_SSSS Feature: gene Location: 256187-257803 bp Feature: domain Description: DUF4297 Location: 256214-256814 bp Feature: domain Description: DUF42 97 Location: 2 562 14-2 56814 bp Feature: domain Description: DUF1837 Location: 257069-257747 bp Feature: domain Description: DUF1837 Location: 2 57069-2 57747 bp Feature: gene Location: 258294-259529 bp Feature: gene Location: 259716-260891 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 259992-260619 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 59992 -2 60619 bp Feature: gene Location: 260918-262111 bp Feature: gene Location: 262161-262433 bp Feature: gene Location: 281200-282006 bp Feature: domain Description: xerC Location: 281356-281992 bp Feature: domain Description: xerC Location: 2 81356-2 81992 bp Feature: gene Location: 282599-282793 bp Feature: gene Location: 282828-284117 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 283074-283659 bp Feature: RT Description: RVT-G2 L4 Note: G2 L4 RT Location: 2 83074-2 83659 bp Feature: gene Location: 284222-284404 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 284252-284357 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 2 842 52 -2 84357 bp Feature: gene Location: 284521-284982 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4297 (pfam14130), DUF1837 (pfam08878), RVT-Retrons, xerC (PRK01287), RVT-G2L4, CxxC_CXXC_SSSS (smart00834)