myRT

myRT report for GCA_900590125.1_p3.C9

Download annotations/find similar RTs

Seq: UULQ01000006.1 (187994 bp)
Overview 1 RT 1: 113624-122724 bp Neighborhood of RT #1 [113624, 122741] Integrase_1 BRR2 BRR2 RVT-UG5 COG3905 ParE Feature: gene Location: 113624-114604 bp Feature: domain Description: Integrase_1 Location: 114011-114446 bp Feature: domain Description: Integrase_1 Location: 1 1 401 1 -1 1 4446 bp Feature: gene Location: 115989-118106 bp Feature: domain Description: BRR2 Location: 116241-116625 bp Feature: domain Description: BRR2 Location: 1 1 6241 -1 1 6625 bp Feature: domain Description: BRR2 Location: 116895-117465 bp Feature: domain Description: BRR2 Location: 1 1 6895-1 1 7465 bp Feature: gene Location: 118322-121558 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 118850-119333 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1 1 8850-1 1 9333 bp Feature: gene Location: 122225-122488 bp Feature: domain Description: COG3905 Location: 122240-122447 bp Feature: domain Description: COG3905 Location: 1 22240-1 22447 bp Feature: gene Location: 122451-122741 bp Feature: domain Description: ParE Location: 122454-122724 bp Feature: domain Description: ParE Location: 1 22454-1 22724 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Integrase_1 (pfam12835), BRR2 (COG1204), RVT-UG5, COG3905 (Predicted transcriptional regulator ), ParE (COG3668)

Seq: UULQ01000045.1 (496191 bp)
Overview 1 RT 1: 229012-235258 bp 2 RT 2: 254025-257807 bp Neighborhood of RT #1 [229012, 235258] DUF4297 DUF1837 RVT-Retrons Neighborhood of RT #2 [254025, 257807] xerC RVT-G2L4 CxxC_CXXC_SSSS Feature: gene Location: 229012-230628 bp Feature: domain Description: DUF4297 Location: 229039-229639 bp Feature: domain Description: DUF42 97 Location: 2 2 9039-2 2 9639 bp Feature: domain Description: DUF1837 Location: 229894-230572 bp Feature: domain Description: DUF1837 Location: 2 2 9894-2 30572 bp Feature: gene Location: 231119-232354 bp Feature: gene Location: 232541-233716 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 232817-233444 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 32 817-2 33444 bp Feature: gene Location: 233743-234936 bp Feature: gene Location: 234986-235258 bp Feature: gene Location: 254025-254831 bp Feature: domain Description: xerC Location: 254181-254817 bp Feature: domain Description: xerC Location: 2 54181-2 54817 bp Feature: gene Location: 255424-255618 bp Feature: gene Location: 255653-256942 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 255899-256484 bp Feature: RT Description: RVT-G2 L4 Note: G2 L4 RT Location: 2 55899-2 56484 bp Feature: gene Location: 257047-257229 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 257077-257182 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 2 57077-2 57182 bp Feature: gene Location: 257346-257807 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4297 (pfam14130), DUF1837 (pfam08878), RVT-Retrons, xerC (PRK01287), RVT-G2L4, CxxC_CXXC_SSSS (smart00834)