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myRT report for GCA_900590125.1_p3.C9
Download annotations/find similar RTs
Seq:
UULQ01000006.1 (187994 bp)
Overview
1
RT 1: 113624-122724 bp
Neighborhood of RT #1 [113624, 122741]
Integrase_1
BRR2
BRR2
RVT-UG5
COG3905
ParE
Feature: gene
Location: 113624-114604 bp
Feature: domain
Description: Integrase_1
Location: 114011-114446 bp
Feature: domain
Description: Integrase_1
Location: 1 1 401 1 -1 1 4446 bp
Feature: gene
Location: 115989-118106 bp
Feature: domain
Description: BRR2
Location: 116241-116625 bp
Feature: domain
Description: BRR2
Location: 1 1 6241 -1 1 6625 bp
Feature: domain
Description: BRR2
Location: 116895-117465 bp
Feature: domain
Description: BRR2
Location: 1 1 6895-1 1 7465 bp
Feature: gene
Location: 118322-121558 bp
Feature: RT
Description: RVT-UG5
Note: UG5 RT
Location: 118850-119333 bp
Feature: RT
Description: RVT-UG5
Note: UG5 RT
Location: 1 1 8850-1 1 9333 bp
Feature: gene
Location: 122225-122488 bp
Feature: domain
Description: COG3905
Location: 122240-122447 bp
Feature: domain
Description: COG3905
Location: 1 22240-1 22447 bp
Feature: gene
Location: 122451-122741 bp
Feature: domain
Description: ParE
Location: 122454-122724 bp
Feature: domain
Description: ParE
Location: 1 22454-1 22724 bp
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Associated domains:
Seq:
UULQ01000045.1 (496191 bp)
Overview
1
RT 1: 229012-235258 bp
2
RT 2: 254025-257807 bp
Neighborhood of RT #1 [229012, 235258]
DUF4297
DUF1837
RVT-Retrons
Neighborhood of RT #2 [254025, 257807]
xerC
RVT-G2L4
CxxC_CXXC_SSSS
Feature: gene
Location: 229012-230628 bp
Feature: domain
Description: DUF4297
Location: 229039-229639 bp
Feature: domain
Description: DUF42 97
Location: 2 2 9039-2 2 9639 bp
Feature: domain
Description: DUF1837
Location: 229894-230572 bp
Feature: domain
Description: DUF1837
Location: 2 2 9894-2 30572 bp
Feature: gene
Location: 231119-232354 bp
Feature: gene
Location: 232541-233716 bp
Feature: RT
Description: RVT-Retrons
Note: Retrons RT
Location: 232817-233444 bp
Feature: RT
Description: RVT-Retrons
Note: Retrons RT
Location: 2 32 817-2 33444 bp
Feature: gene
Location: 233743-234936 bp
Feature: gene
Location: 234986-235258 bp
Feature: gene
Location: 254025-254831 bp
Feature: domain
Description: xerC
Location: 254181-254817 bp
Feature: domain
Description: xerC
Location: 2 54181-2 54817 bp
Feature: gene
Location: 255424-255618 bp
Feature: gene
Location: 255653-256942 bp
Feature: RT
Description: RVT-G2L4
Note: G2L4 RT
Location: 255899-256484 bp
Feature: RT
Description: RVT-G2 L4
Note: G2 L4 RT
Location: 2 55899-2 56484 bp
Feature: gene
Location: 257047-257229 bp
Feature: domain
Description: CxxC_CXXC_SSSS
Location: 257077-257182 bp
Feature: domain
Description: CxxC_CXXC_SSSS
Location: 2 57077-2 57182 bp
Feature: gene
Location: 257346-257807 bp
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Associated domains: