myRT

myRT report for GCA_900590245.1_p3.D2

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Seq: UULZ01000132.1 (12773 bp)
Overview 1 RT 1: 8595-12423 bp Neighborhood of RT #1 [8595, 12423] ICE_RAQPRD xerC RVT-G2L4 CxxC_CXXC_SSSS Feature: gene Location: 8595-8930 bp Feature: domain Description: ICE_RAQPRD Location: 8625-8895 bp Feature: domain Description: ICE_RAQPRD Location: 8625-8895 bp Feature: gene Location: 9126-9932 bp Feature: domain Description: xerC Location: 9282-9918 bp Feature: domain Description: xerC Location: 9282-991 8 bp Feature: gene Location: 10269-11558 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 10515-11100 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 1 051 5-1 1 1 00 bp Feature: gene Location: 11663-11845 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 11693-11798 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 1 1 693-1 1 798 bp Feature: gene Location: 11962-12423 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ICE_RAQPRD (TIGR01690), xerC (PRK01287), RVT-G2L4, CxxC_CXXC_SSSS (smart00834)

Seq: UULZ01000125.1 (37186 bp)
Overview 1 RT 1: 21300-27896 bp Neighborhood of RT #1 [21300, 28474] DUF4297 DUF1837 RVT-Retrons HEPN_MAE_28990 Feature: gene Location: 21300-22916 bp Feature: domain Description: DUF4297 Location: 21327-21927 bp Feature: domain Description: DUF42 97 Location: 2 132 7-2 192 7 bp Feature: domain Description: DUF1837 Location: 22182-22860 bp Feature: domain Description: DUF1837 Location: 2 2 182 -2 2 860 bp Feature: gene Location: 23407-24642 bp Feature: gene Location: 24829-26004 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 25105-25732 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 5105-2 5732 bp Feature: gene Location: 26031-27224 bp Feature: gene Location: 27503-28474 bp Feature: domain Description: HEPN_MAE_28990 Location: 27647-27896 bp Feature: domain Description: HEPN_MAE_2 8990 Location: 2 7647-2 7896 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4297 (pfam14130), DUF1837 (pfam08878), RVT-Retrons, HEPN_MAE_28990 (pfam18737)

Seq: UULZ01000089.1 (112628 bp)
Overview 1 RT 1: 99561-108661 bp Neighborhood of RT #1 [99561, 108678] Integrase_1 BRR2 BRR2 RVT-UG5 COG3905 ParE Feature: gene Location: 99561-100541 bp Feature: domain Description: Integrase_1 Location: 99948-100383 bp Feature: domain Description: Integrase_1 Location: 99948-1003 83 bp Feature: gene Location: 101926-104043 bp Feature: domain Description: BRR2 Location: 102178-102562 bp Feature: domain Description: BRR2 Location: 102178-102562 bp Feature: domain Description: BRR2 Location: 102832-103402 bp Feature: domain Description: BRR2 Location: 10283 2-103 402 bp Feature: gene Location: 104259-107495 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 104787-105270 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 104787-105270 bp Feature: gene Location: 108162-108425 bp Feature: domain Description: COG3905 Location: 108177-108384 bp Feature: domain Description: COG3 905 Location: 108177-1083 84 bp Feature: gene Location: 108388-108678 bp Feature: domain Description: ParE Location: 108391-108661 bp Feature: domain Description: ParE Location: 1083 91-108661 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Integrase_1 (pfam12835), BRR2 (COG1204), RVT-UG5, COG3905 (Predicted transcriptional regulator ), ParE (COG3668)