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myRT report for GCA_900590275.1_p3.D9
Download annotations/find similar RTs
Seq:
UUMD01000038.1 (669604 bp)
Overview
1
RT 1: 256186-262432 bp
2
RT 2: 281199-284981 bp
Neighborhood of RT #1 [256186, 262432]
DUF4297
DUF1837
RVT-Retrons
Neighborhood of RT #2 [281199, 284981]
xerC
RVT-G2L4
CxxC_CXXC_SSSS
Feature: gene
Location: 256186-257802 bp
Feature: domain
Description: DUF4297
Location: 256213-256813 bp
Feature: domain
Description: DUF4297
Location: 25621 3-25681 3 bp
Feature: domain
Description: DUF1837
Location: 257068-257746 bp
Feature: domain
Description: DUF1 837
Location: 257068-257746 bp
Feature: gene
Location: 258293-259528 bp
Feature: gene
Location: 259715-260890 bp
Feature: RT
Description: RVT-Retrons
Note: Retrons RT
Location: 259991-260618 bp
Feature: RT
Description: RVT-Retrons
Note: Retrons RT
Location: 259991 -26061 8 bp
Feature: gene
Location: 260917-262110 bp
Feature: gene
Location: 262160-262432 bp
Feature: gene
Location: 281199-282005 bp
Feature: domain
Description: xerC
Location: 281355-281991 bp
Feature: domain
Description: xerC
Location: 281 355-281 991 bp
Feature: gene
Location: 282598-282792 bp
Feature: gene
Location: 282827-284116 bp
Feature: RT
Description: RVT-G2L4
Note: G2L4 RT
Location: 283073-283658 bp
Feature: RT
Description: RVT-G2L4
Note: G2L4 RT
Location: 283073-283658 bp
Feature: gene
Location: 284221-284403 bp
Feature: domain
Description: CxxC_CXXC_SSSS
Location: 284251-284356 bp
Feature: domain
Description: CxxC_CXXC_SSSS
Location: 284251 -284356 bp
Feature: gene
Location: 284520-284981 bp
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Associated domains:
myRT
DUF4297 (pfam14130)
,
DUF1837 (pfam08878)
,
RVT-Retrons
,
xerC (PRK01287)
,
RVT-G2L4
,
CxxC_CXXC_SSSS (smart00834)