myRT

myRT report for GCA_900590985.1_p4.D8

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Seq: UUOY01000042.1 (126744 bp)
Overview 1 RT 1: 4004-12963 bp Neighborhood of RT #1 [4004, 13121] ParE COG3905 RVT-UG5 BRR2 BRR2 Integrase_1 Feature: gene Location: 4004-4294 bp Feature: domain Description: ParE Location: 4007-4277 bp Feature: domain Description: ParE Location: 4007-4277 bp Feature: gene Location: 4257-4520 bp Feature: domain Description: COG3905 Location: 4272-4479 bp Feature: domain Description: COG3905 Location: 4272-4479 bp Feature: gene Location: 5187-8423 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 5715-6198 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 571 5-61 98 bp Feature: gene Location: 8639-10756 bp Feature: domain Description: BRR2 Location: 8891-9275 bp Feature: domain Description: BRR2 Location: 8891 -9275 bp Feature: domain Description: BRR2 Location: 9545-10115 bp Feature: domain Description: BRR2 Location: 9545-1 01 1 5 bp Feature: gene Location: 12141-13121 bp Feature: domain Description: Integrase_1 Location: 12528-12963 bp Feature: domain Description: Integrase_1 Location: 1 2528-1 2963 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ParE (COG3668), COG3905 (Predicted transcriptional regulator ), RVT-UG5, BRR2 (COG1204), Integrase_1 (pfam12835)

Seq: UUOY01000001.1 (835727 bp)
Overview 1 RT 1: 412829-419075 bp 2 RT 2: 437842-441624 bp Neighborhood of RT #1 [412829, 419075] DUF4297 DUF1837 RVT-Retrons Neighborhood of RT #2 [437842, 441624] xerC RVT-G2L4 CxxC_CXXC_SSSS Feature: gene Location: 412829-414445 bp Feature: domain Description: DUF4297 Location: 412856-413456 bp Feature: domain Description: DUF42 97 Location: 412 856-413456 bp Feature: domain Description: DUF1837 Location: 413711-414389 bp Feature: domain Description: DUF1837 Location: 413711-414389 bp Feature: gene Location: 414936-416171 bp Feature: gene Location: 416358-417533 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 416634-417261 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 416634-4172 61 bp Feature: gene Location: 417560-418753 bp Feature: gene Location: 418803-419075 bp Feature: gene Location: 437842-438648 bp Feature: domain Description: xerC Location: 437998-438634 bp Feature: domain Description: xerC Location: 437998-438634 bp Feature: gene Location: 439241-439435 bp Feature: gene Location: 439470-440759 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 439716-440301 bp Feature: RT Description: RVT-G2 L4 Note: G2 L4 RT Location: 439716-440301 bp Feature: gene Location: 440864-441046 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 440894-440999 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 440894-440999 bp Feature: gene Location: 441163-441624 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4297 (pfam14130), DUF1837 (pfam08878), RVT-Retrons, xerC (PRK01287), RVT-G2L4, CxxC_CXXC_SSSS (smart00834)