myRT

myRT report for GCA_900592035.1_10156_3_24

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Seq: UUSX01000004.1 (323863 bp)
Overview 1 RT 1: 250827-253466 bp Neighborhood of RT #1 [250827, 253466] RVT-Retrons HipB Feature: gene Location: 250827-251078 bp Feature: gene Location: 251251-251568 bp Feature: gene Location: 251969-252970 bp Ori: VBG38654.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 252182-252713 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2521 82-25271 3 bp Feature: gene Location: 252924-253253 bp Ori: VBG38656.1 Feature: domain Description: HipB Location: 252927-253149 bp Feature: domain Description: HipB Location: 252927-2531 49 bp Feature: gene Location: 253299-253466 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, HipB (COG1396)

Seq: UUSX01000007.1 (300758 bp)
Overview 1 RT 1: 106238-110775 bp Neighborhood of RT #1 [106238, 110775] CxxCxxCC RVT-UG17 SLATT_5 Feature: gene Location: 106238-106711 bp Feature: gene Location: 106897-107457 bp Ori: VBG43321.1 Feature: domain Description: CxxCxxCC Location: 107095-107311 bp Feature: domain Description: CxxCxxCC Location: 107095-107311 bp Feature: gene Location: 108393-109142 bp Ori: VBG43328.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 108402-108588 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 108402 -108588 bp Feature: gene Location: 109464-109988 bp Ori: VBG43334.1 Feature: domain Description: SLATT_5 Location: 109467-109950 bp Feature: domain Description: SLATT_5 Location: 109467-109950 bp Feature: gene Location: 110041-110775 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CxxCxxCC (pfam03692), RVT-UG17, SLATT_5 (pfam18160)

Seq: UUSX01000013.1 (209937 bp)
Overview 1 RT 1: 117880-123898 bp Neighborhood of RT #1 [117880, 124068] AAA15 AAA_21 excise RVT-Retrons PAAR_CT_2 Feature: gene Location: 117880-119832 bp Ori: VBG52824.1 Feature: domain Description: AAA15 Location: 117943-118027 bp Feature: domain Description: AAA15 Location: 117943 -118027 bp Feature: domain Description: AAA_21 Location: 118432-118891 bp Feature: domain Description: AAA_21 Location: 11843 2-118891 bp Feature: gene Location: 120177-120626 bp Ori: VBG52827.1 Feature: domain Description: excise Location: 120414-120549 bp Feature: domain Description: excise Location: 120414-120549 bp Feature: gene Location: 121184-122122 bp Ori: VBG52831.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 121304-121883 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1213 04-121883 bp Feature: gene Location: 122115-123035 bp Feature: gene Location: 123643-124068 bp Ori: VBG52839.1 Feature: domain Description: PAAR_CT_2 Location: 123655-123898 bp Feature: domain Description: PAAR_CT_2 Location: 123 655-123 898 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA15 (COG1106), AAA_21 (pfam13304), excise (TIGR01764), RVT-Retrons, PAAR_CT_2 (cd14744)