myRT

myRT report for GCA_900600195.1_p6.D7

Download annotations/find similar RTs

Seq: UVYH01000054.1 (411495 bp)
Overview 1 RT 1: 59856-68956 bp Neighborhood of RT #1 [59856, 68973] Integrase_1 BRR2 BRR2 RVT-UG5 COG3905 ParE Feature: gene Location: 59856-60836 bp Feature: domain Description: Integrase_1 Location: 60243-60678 bp Feature: domain Description: Integrase_1 Location: 60243-60678 bp Feature: gene Location: 62221-64338 bp Feature: domain Description: BRR2 Location: 62473-62857 bp Feature: domain Description: BRR2 Location: 62473-62857 bp Feature: domain Description: BRR2 Location: 63127-63697 bp Feature: domain Description: BRR2 Location: 631 27-63697 bp Feature: gene Location: 64554-67790 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 65082-65565 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 65082-65565 bp Feature: gene Location: 68457-68720 bp Feature: domain Description: COG3905 Location: 68472-68679 bp Feature: domain Description: COG3905 Location: 68472-68679 bp Feature: gene Location: 68683-68973 bp Feature: domain Description: ParE Location: 68686-68956 bp Feature: domain Description: ParE Location: 68686-68956 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Integrase_1 (pfam12835), BRR2 (COG1204), RVT-UG5, COG3905 (Predicted transcriptional regulator ), ParE (COG3668)

Seq: UVYH01000001.1 (890936 bp)
Overview 1 RT 1: 100255-102849 bp 2 RT 2: 119564-128994 bp Neighborhood of RT #1 [100255, 102849] CxxC_CXXC_SSSS RVT-G2L4 Neighborhood of RT #2 [119564, 129050] TraI_2 TraI_2_C RVT-Retrons DUF4297 DUF1837 Feature: gene Location: 100255-100716 bp Feature: gene Location: 100833-101015 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 100863-100968 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 100863-100968 bp Feature: gene Location: 101120-102409 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 101366-101951 bp Feature: RT Description: RVT-G2 L4 Note: G2 L4 RT Location: 101366-101951 bp Feature: gene Location: 102444-102638 bp Feature: gene Location: 102718-102849 bp Feature: gene Location: 119564-121288 bp Feature: domain Description: TraI_2 Location: 119633-120569 bp Feature: domain Description: TraI_2 Location: 119633-12 0569 bp Feature: domain Description: TraI_2_C Location: 120914-121274 bp Feature: domain Description: TraI_2 _C Location: 12 0914-12 12 74 bp Feature: gene Location: 123126-124319 bp Feature: gene Location: 124346-125521 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 124622-125249 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12 462 2 -12 52 49 bp Feature: gene Location: 125708-126943 bp Feature: gene Location: 127434-129050 bp Feature: domain Description: DUF4297 Location: 127461-128061 bp Feature: domain Description: DUF42 97 Location: 12 7461-12 8061 bp Feature: domain Description: DUF1837 Location: 128316-128994 bp Feature: domain Description: DUF1837 Location: 12 8316-12 8994 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CxxC_CXXC_SSSS (smart00834), RVT-G2L4, TraI_2 (pfam07514), TraI_2_C (pfam07515), RVT-Retrons, DUF4297 (pfam14130), DUF1837 (pfam08878)