myRT

myRT report for GCA_900600245.1_p6.E7

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Seq: UVYP01000009.1 (188082 bp)
Overview 1 RT 1: 113695-122795 bp Neighborhood of RT #1 [113695, 122812] Integrase_1 BRR2 BRR2 RVT-UG5 COG3905 ParE Feature: gene Location: 113695-114675 bp Feature: domain Description: Integrase_1 Location: 114082-114517 bp Feature: domain Description: Integrase_1 Location: 1 1 4082-1 1 451 7 bp Feature: gene Location: 116060-118177 bp Feature: domain Description: BRR2 Location: 116312-116696 bp Feature: domain Description: BRR2 Location: 1 1 631 2-1 1 6696 bp Feature: domain Description: BRR2 Location: 116966-117536 bp Feature: domain Description: BRR2 Location: 1 1 6966-1 1 7536 bp Feature: gene Location: 118393-121629 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 118921-119404 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1 1 8921 -1 1 9404 bp Feature: gene Location: 122296-122559 bp Feature: domain Description: COG3905 Location: 122311-122518 bp Feature: domain Description: COG3905 Location: 1 2231 1 -1 2251 8 bp Feature: gene Location: 122522-122812 bp Feature: domain Description: ParE Location: 122525-122795 bp Feature: domain Description: ParE Location: 1 22525-1 22795 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Integrase_1 (pfam12835), BRR2 (COG1204), RVT-UG5, COG3905 (Predicted transcriptional regulator ), ParE (COG3668)

Seq: UVYP01000060.1 (514592 bp)
Overview 1 RT 1: 247398-253644 bp 2 RT 2: 272411-276193 bp Neighborhood of RT #1 [247398, 253644] DUF4297 DUF1837 RVT-Retrons Neighborhood of RT #2 [272411, 276193] xerC RVT-G2L4 CxxC_CXXC_SSSS Feature: gene Location: 247398-249014 bp Feature: domain Description: DUF4297 Location: 247425-248025 bp Feature: domain Description: DUF42 97 Location: 2 4742 5-2 4802 5 bp Feature: domain Description: DUF1837 Location: 248280-248958 bp Feature: domain Description: DUF1837 Location: 2 482 80-2 48958 bp Feature: gene Location: 249505-250740 bp Feature: gene Location: 250927-252102 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 251203-251830 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 512 03-2 51830 bp Feature: gene Location: 252129-253322 bp Feature: gene Location: 253372-253644 bp Feature: gene Location: 272411-273217 bp Feature: domain Description: xerC Location: 272567-273203 bp Feature: domain Description: xerC Location: 2 72 567-2 732 03 bp Feature: gene Location: 273810-274004 bp Feature: gene Location: 274039-275328 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 274285-274870 bp Feature: RT Description: RVT-G2 L4 Note: G2 L4 RT Location: 2 742 85-2 74870 bp Feature: gene Location: 275433-275615 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 275463-275568 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 2 75463-2 75568 bp Feature: gene Location: 275732-276193 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4297 (pfam14130), DUF1837 (pfam08878), RVT-Retrons, xerC (PRK01287), RVT-G2L4, CxxC_CXXC_SSSS (smart00834)