myRT

myRT report for GCA_900602875.1_p9.G6

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Seq: UWIQ01000018.1 (146535 bp)
Overview 1 RT 1: 59881-68981 bp Neighborhood of RT #1 [59881, 68998] Integrase_1 BRR2 BRR2 RVT-UG5 COG3905 ParE Feature: gene Location: 59881-60861 bp Feature: domain Description: Integrase_1 Location: 60268-60703 bp Feature: domain Description: Integrase_1 Location: 60268-60703 bp Feature: gene Location: 62246-64363 bp Feature: domain Description: BRR2 Location: 62498-62882 bp Feature: domain Description: BRR2 Location: 62498-62882 bp Feature: domain Description: BRR2 Location: 63152-63722 bp Feature: domain Description: BRR2 Location: 631 52-63722 bp Feature: gene Location: 64579-67815 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 65107-65590 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 651 07-65590 bp Feature: gene Location: 68482-68745 bp Feature: domain Description: COG3905 Location: 68497-68704 bp Feature: domain Description: COG3905 Location: 68497-68704 bp Feature: gene Location: 68708-68998 bp Feature: domain Description: ParE Location: 68711-68981 bp Feature: domain Description: ParE Location: 6871 1 -68981 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Integrase_1 (pfam12835), BRR2 (COG1204), RVT-UG5, COG3905 (Predicted transcriptional regulator ), ParE (COG3668)

Seq: UWIQ01000075.1 (381871 bp)
Overview 1 RT 1: 252813-259059 bp 2 RT 2: 277826-281608 bp Neighborhood of RT #1 [252813, 259059] DUF4297 DUF1837 RVT-Retrons Neighborhood of RT #2 [277826, 281608] xerC RVT-G2L4 CxxC_CXXC_SSSS Feature: gene Location: 252813-254429 bp Feature: domain Description: DUF4297 Location: 252840-253440 bp Feature: domain Description: DUF42 97 Location: 2 52 840-2 53440 bp Feature: domain Description: DUF1837 Location: 253695-254373 bp Feature: domain Description: DUF1837 Location: 2 53695-2 54373 bp Feature: gene Location: 254920-256155 bp Feature: gene Location: 256342-257517 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 256618-257245 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 56618-2 572 45 bp Feature: gene Location: 257544-258737 bp Feature: gene Location: 258787-259059 bp Feature: gene Location: 277826-278632 bp Feature: domain Description: xerC Location: 277982-278618 bp Feature: domain Description: xerC Location: 2 77982 -2 78618 bp Feature: gene Location: 279225-279419 bp Feature: gene Location: 279454-280743 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 279700-280285 bp Feature: RT Description: RVT-G2 L4 Note: G2 L4 RT Location: 2 79700-2 802 85 bp Feature: gene Location: 280848-281030 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 280878-280983 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 2 80878-2 80983 bp Feature: gene Location: 281147-281608 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4297 (pfam14130), DUF1837 (pfam08878), RVT-Retrons, xerC (PRK01287), RVT-G2L4, CxxC_CXXC_SSSS (smart00834)