myRT

myRT report for GCA_900604295.1_Rhod_genome

Download annotations/find similar RTs

Seq: UWOC01000148.1 (141434 bp)
Overview 1 RT 1: 38643-46084 bp Neighborhood of RT #1 [38643, 46092] Arm-DNA-bind_3 INT_Rci_Hp1_C RVT-GII GIIM AbiEii Lon_rel_chp Feature: gene Location: 38643-39971 bp Feature: domain Description: Arm-DNA-bind_3 Location: 38661-38946 bp Feature: domain Description: Arm-DNA-bind_3 Location: 38661 -38946 bp Feature: domain Description: INT_Rci_Hp1_C Location: 39339-39825 bp Feature: domain Description: INT_Rci_Hp1 _C Location: 39339-39825 bp Feature: gene Location: 39968-40756 bp Feature: gene Location: 41738-43129 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41915-42677 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 91 5-42677 bp Feature: domain Description: GIIM Note: maturase Location: 42752-42980 bp Feature: domain Description: GIIM Note: maturase Location: 42752-42980 bp Feature: gene Location: 43433-44011 bp Feature: domain Description: AbiEii Location: 43439-43952 bp Feature: domain Description: AbiEii Location: 43439-43952 bp Feature: gene Location: 44044-46092 bp Feature: domain Description: Lon_rel_chp Location: 44059-46084 bp Feature: domain Description: Lon_rel_chp Location: 44059-46084 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_3 (pfam13356), INT_Rci_Hp1_C (cd00796), RVT-GII, GIIM (pfam08388), AbiEii (pfam08843), Lon_rel_chp (TIGR02653)

Seq: UWOC01000137.1 (159178 bp)
Overview 1 RT 1: 96950-104905 bp Neighborhood of RT #1 [96950, 104955] RAMP_I_III RVT-CRISPR Cas1_I-II-III Cas2_I_II_III CRISPR_Cas6 Feature: gene Location: 96950-98845 bp Feature: domain Description: RAMP_I_III Location: 97040-97517 bp Feature: domain Description: RAMP_I_III Location: 97040-97517 bp Feature: gene Location: 98842-100578 bp Feature: gene Location: 101626-103650 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 101869-102454 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 101869-102 454 bp Feature: domain Description: Cas1_I-II-III Location: 102640-103612 bp Feature: domain Description: Cas1_I-II-III Location: 102 640-103612 bp Feature: gene Location: 103595-103942 bp Feature: domain Description: Cas2_I_II_III Location: 103682-103892 bp Feature: domain Description: Cas2 _I_II_III Location: 103682 -103892 bp Feature: gene Location: 103939-104955 bp Feature: domain Description: CRISPR_Cas6 Location: 104542-104905 bp Feature: domain Description: CRISPR_Cas6 Location: 104542 -104905 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RAMP_I_III (cl21471), RVT-CRISPR, Cas1_I-II-III (cl00656), Cas2_I_II_III (cl11442), CRISPR_Cas6 (pfam10040)