myRT

myRT report for GCA_900607375.1_kpneu001

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Seq: UWUX01000002.1 (231212 bp)
Overview 1 RT 1: 105680-110058 bp Neighborhood of RT #1 [105680, 110058] umuC PRK10276 RVT-GII RVT-GII Feature: gene Location: 105680-106951 bp Feature: domain Description: umuC Location: 105683-106946 bp Feature: domain Description: umuC Location: 1 05683-1 06946 bp Feature: gene Location: 106951-107376 bp Feature: domain Description: PRK10276 Location: 106954-107362 bp Feature: domain Description: PRK1 0276 Location: 1 06954-1 07362 bp Feature: gene Location: 107924-108652 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 108176-108545 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 081 76-1 08545 bp Feature: gene Location: 108652-109257 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 108655-108865 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 08655-1 08865 bp Feature: gene Location: 109491-109721 bp Feature: gene Location: 109780-110058 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: UWUX01000001.1 (5460544 bp)
Overview 1 RT 1: 2806063-2812534 bp 2 RT 2: 4047725-4053547 bp 3 RT 3: 4233978-4237819 bp 4 RT 4: 4578195-4579888 bp 5 RT 5: 5019570-5023021 bp Neighborhood of RT #1 [2806063, 2812548] SbcB dacD RVT-GII PRK10016 YccC Neighborhood of RT #2 [4047725, 4053603] umuC PRK10276 RVT-GII RVT-GII PinE Rve Neighborhood of RT #3 [4233978, 4237819] umuC PRK10276 RVT-GII RVT-GII Neighborhood of RT #4 [4578195, 4579888] RVT-GII RVT-GII Neighborhood of RT #5 [5019570, 5023077] PRK10276 PRK10276 RVT-GII RVT-GII Laminin_G_3 Feature: gene Location: 2806063-2807487 bp Feature: domain Description: SbcB Location: 2806069-2807485 bp Feature: domain Description: SbcB Location: 2 806069-2 807485 bp Feature: gene Location: 2807662-2808831 bp Feature: domain Description: dacD Location: 2807671-2808826 bp Feature: domain Description: dacD Location: 2 807671-2 80882 6 bp Feature: gene Location: 2809349-2810836 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2809754-2810444 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 809754-2 810444 bp Feature: gene Location: 2810918-2811391 bp Feature: domain Description: PRK10016 Location: 2810921-2811380 bp Feature: domain Description: PRK10016 Location: 2 81092 1-2 811380 bp Feature: gene Location: 2811475-2812548 bp Feature: domain Description: YccC Location: 2811496-2812534 bp Feature: domain Description: YccC Location: 2 811496-2 812 534 bp Feature: gene Location: 4047725-4048990 bp Feature: domain Description: umuC Location: 4047728-4048988 bp Feature: domain Description: umuC Location: 404772 8-4048988 bp Feature: gene Location: 4048992-4049411 bp Feature: domain Description: PRK10276 Location: 4048995-4049406 bp Feature: domain Description: PRK102 76 Location: 4048995-4049406 bp Feature: gene Location: 4049491-4050096 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4049494-4049704 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4049494-4049704 bp Feature: gene Location: 4050096-4051106 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4050633-4050999 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4050633-4050999 bp Feature: gene Location: 4052372-4052881 bp Feature: domain Description: PinE Location: 4052420-4052873 bp Feature: domain Description: PinE Location: 4052 42 0-4052 873 bp Feature: gene Location: 4052887-4053603 bp Feature: domain Description: Rve Location: 4052902-4053547 bp Feature: domain Description: Rve Location: 4052 902 -4053547 bp Feature: gene Location: 4233978-4235243 bp Feature: domain Description: umuC Location: 4233981-4235241 bp Feature: domain Description: umuC Location: 42 33981-42 352 41 bp Feature: gene Location: 4235246-4235665 bp Feature: domain Description: PRK10276 Location: 4235249-4235660 bp Feature: domain Description: PRK102 76 Location: 42 352 49-42 35660 bp Feature: gene Location: 4235744-4236349 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4235747-4235957 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 35747-42 35957 bp Feature: gene Location: 4236349-4237077 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4236601-4236970 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 36601-42 36970 bp Feature: gene Location: 4237216-4237428 bp Feature: gene Location: 4237673-4237819 bp Feature: gene Location: 4578195-4578800 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4578198-4578408 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4578198-4578408 bp Feature: gene Location: 4578800-4579375 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4578899-4579268 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4578899-45792 68 bp Feature: gene Location: 4579383-4579514 bp Feature: gene Location: 4579676-4579888 bp Feature: gene Location: 5019570-5019887 bp Feature: domain Description: PRK10276 Location: 5019576-5019690 bp Feature: domain Description: PRK102 76 Location: 5019576-5019690 bp Feature: domain Description: PRK10276 Location: 5019717-5019786 bp Feature: domain Description: PRK102 76 Location: 5019717-5019786 bp Feature: gene Location: 5019935-5020114 bp Feature: gene Location: 5020204-5020809 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5020207-5020417 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 502 02 07-502 0417 bp Feature: gene Location: 5020809-5021687 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5021211-5021580 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 502 12 11-502 1580 bp Feature: gene Location: 5021696-5021863 bp Feature: gene Location: 5022346-5023077 bp Feature: domain Description: Laminin_G_3 Location: 5022667-5023021 bp Feature: domain Description: Laminin_G_3 Location: 502 2 667-502 302 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SbcB (COG2925), dacD (PRK11397), RVT-GII, PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), PinE (COG1961), Rve (COG3316), Laminin_G_3 (pfam13385)