myRT

myRT report for GCA_900607385.1_kpneu000

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Seq: UWZM01000001.1 (5410345 bp)
Overview 1 RT 1: 1316232-1319480 bp 2 RT 2: 1661217-1665317 bp 3 RT 3: 1846390-1851322 bp 4 RT 4: 3087209-3092086 bp Neighborhood of RT #1 [1316232, 1319872] YbjK int RVT-GII RVT-GII Neighborhood of RT #2 [1661217, 1665319] DinI RVT-GII PRK10276 umuC Neighborhood of RT #3 [1846390, 1851342] PinE group_II_RT_mat RVT-GII PRK10276 umuC Neighborhood of RT #4 [3087209, 3092091] YccC PRK10016 RVT-GII dacD Feature: gene Location: 1316232-1316795 bp Feature: domain Description: YbjK Location: 1316238-1316775 bp Feature: domain Description: YbjK Location: 1 31 6238-1 31 6775 bp Feature: gene Location: 1316918-1317970 bp Feature: domain Description: int Location: 1316921-1317920 bp Feature: domain Description: int Location: 1 31 6921 -1 31 7920 bp Feature: gene Location: 1318386-1319267 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1318791-1319160 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 31 8791 -1 31 91 60 bp Feature: gene Location: 1319267-1319872 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1319270-1319480 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 31 9270-1 31 9480 bp Feature: gene Location: 1661217-1661459 bp Feature: domain Description: DinI Location: 1661268-1661448 bp Feature: domain Description: DinI Location: 1 661 268-1 661 448 bp Feature: gene Location: 1661474-1661620 bp Feature: gene Location: 1662072-1663553 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1662474-1663161 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 662474-1 6631 61 bp Feature: gene Location: 1663632-1664051 bp Feature: domain Description: PRK10276 Location: 1663635-1664046 bp Feature: domain Description: PRK1 0276 Location: 1 663635-1 664046 bp Feature: gene Location: 1664054-1665319 bp Feature: domain Description: umuC Location: 1664057-1665317 bp Feature: domain Description: umuC Location: 1 664057-1 66531 7 bp Feature: gene Location: 1846390-1846899 bp Feature: domain Description: PinE Location: 1846438-1846891 bp Feature: domain Description: PinE Location: 1 846438-1 846891 bp Feature: gene Location: 1848292-1848795 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1848535-1848709 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1 848535-1 848709 bp Feature: gene Location: 1848770-1849780 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1848776-1849388 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 848776-1 849388 bp Feature: gene Location: 1849860-1850279 bp Feature: domain Description: PRK10276 Location: 1849863-1850274 bp Feature: domain Description: PRK1 0276 Location: 1 849863-1 850274 bp Feature: gene Location: 1850281-1851342 bp Feature: domain Description: umuC Location: 1850284-1851322 bp Feature: domain Description: umuC Location: 1 850284-1 851 322 bp Feature: gene Location: 3087209-3088267 bp Feature: domain Description: YccC Location: 3087215-3088253 bp Feature: domain Description: YccC Location: 308721 5-3088253 bp Feature: gene Location: 3088366-3088839 bp Feature: domain Description: PRK10016 Location: 3088369-3088828 bp Feature: domain Description: PRK1 001 6 Location: 3088369-3088828 bp Feature: gene Location: 3088921-3090102 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3089020-3089710 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3089020-308971 0 bp Feature: gene Location: 3090152-3090490 bp Feature: gene Location: 3090922-3092091 bp Feature: domain Description: dacD Location: 3090931-3092086 bp Feature: domain Description: dacD Location: 3090931 -3092086 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YbjK (COG3226), int (PHA02601), RVT-GII, DinI (pfam06183), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), PinE (COG1961), group_II_RT_mat (TIGR04416), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC)
dacD (PRK11397)

Seq: UWZM01000002.1 (231791 bp)
Overview 1 RT 1: 14856-18892 bp Neighborhood of RT #1 [14856, 18892] umuC PRK10276 RVT-GII RVT-GII Feature: gene Location: 14856-16124 bp Feature: domain Description: umuC Location: 14859-16119 bp Feature: domain Description: umuC Location: 14859-16119 bp Feature: gene Location: 16124-16549 bp Feature: domain Description: PRK10276 Location: 16127-16535 bp Feature: domain Description: PRK102 76 Location: 1612 7-16535 bp Feature: gene Location: 16849-17544 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17350-17494 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17350-17494 bp Feature: gene Location: 17660-18076 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17672-17960 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17672 -17960 bp Feature: gene Location: 18173-18307 bp Feature: gene Location: 18344-18892 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII