myRT

myRT report for GCA_900607725.1_ecoli011

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Seq: UWWB01000001.1 (4835219 bp)
Overview 1 RT 1: 427366-433927 bp 2 RT 2: 2286244-2291221 bp Neighborhood of RT #1 [427366, 433962] PRK11233 cbl RVT-UG12 Phage_int_SAM_2 Integrase_1 SfsB Neighborhood of RT #2 [2286244, 2291256] TnpB_IS66 PHA02517 RVT-GII GIIM zinc_ribbon_11 zinc_ribbon_11 Feature: gene Location: 427366-428283 bp Ori: VCW99868.1 Gene: gltC_3 Feature: domain Description: PRK11233 Location: 427369-428281 bp Feature: domain Description: PRK1 1 233 Location: 427369-428281 bp Feature: gene Location: 428385-429335 bp Ori: VCW99869.1 Gene: cbl Feature: domain Description: cbl Location: 428388-429333 bp Feature: domain Description: cbl Location: 428388-429333 bp Feature: gene Location: 430062-431618 bp Ori: VCW99870.1 Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 430413-430848 bp Feature: RT Description: RVT-UG1 2 Note: UG1 2 RT Location: 43041 3-430848 bp Feature: gene Location: 431926-432633 bp Ori: VCW99871.1 Feature: domain Description: Phage_int_SAM_2 Location: 431932-432022 bp Feature: domain Description: Phage_int_SAM_2 Location: 431 932-432022 bp Feature: domain Description: Integrase_1 Location: 432055-432499 bp Feature: domain Description: Integrase_1 Location: 432055-432499 bp Feature: gene Location: 433714-433962 bp Ori: VCW99872.1 Feature: domain Description: SfsB Location: 433720-433927 bp Feature: domain Description: SfsB Location: 433720-433927 bp Feature: gene Location: 2286244-2286534 bp Ori: VCX01658.1 Feature: domain Description: TnpB_IS66 Location: 2286256-2286505 bp Feature: domain Description: TnpB_IS66 Location: 2286256-2286505 bp Feature: gene Location: 2286531-2286971 bp Ori: VCX01659.1 Feature: domain Description: PHA02517 Location: 2286534-2286942 bp Feature: domain Description: PHA0251 7 Location: 2286534-2286942 bp Feature: gene Location: 2287100-2288623 bp Ori: VCX01660.1 Gene: ltrA_1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2287373-2288105 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2287373-22881 05 bp Feature: domain Description: GIIM Note: maturase Location: 2288180-2288378 bp Feature: domain Description: GIIM Note: maturase Location: 22881 80-2288378 bp Feature: gene Location: 2290433-2290867 bp Ori: VCX01661.1 Feature: domain Description: zinc_ribbon_11 Location: 2290439-2290811 bp Feature: domain Description: zinc_ribbon_1 1 Location: 2290439-229081 1 bp Feature: gene Location: 2290855-2291256 bp Ori: VCX01662.1 Feature: domain Description: zinc_ribbon_11 Location: 2290867-2291221 bp Feature: domain Description: zinc_ribbon_1 1 Location: 2290867-2291 221 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11233 (nitrogen assimilation transcriptional regulator; Provisional), cbl (PRK12679), RVT-UG12, Phage_int_SAM_2 (pfam12834), Integrase_1 (pfam12835), SfsB (COG3423), TnpB_IS66 (pfam05717), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)
zinc_ribbon_11 (pfam11682)

Seq: UWWB01000002.1 (144355 bp)
Overview 1 RT 1: 108453-112822 bp Neighborhood of RT #1 [108453, 112830] ParE_toxin RVT-GII PRK15442 PinE Feature: gene Location: 108453-108620 bp Feature: gene Location: 108746-108949 bp Ori: VCX58227.1 Feature: domain Description: ParE_toxin Location: 108761-108944 bp Feature: domain Description: ParE_toxin Location: 108761-108944 bp Feature: gene Location: 109200-110615 bp Ori: VCX58228.1 Gene: ltrA_2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 109485-110172 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 109485-110172 bp Feature: gene Location: 111230-112090 bp Ori: VCX58229.1 Feature: domain Description: PRK15442 Location: 111239-112088 bp Feature: domain Description: PRK15442 Location: 1112 39-112 088 bp Feature: gene Location: 112273-112830 bp Ori: VCX58230.1 Gene: tnpR_1 Feature: domain Description: PinE Location: 112276-112822 bp Feature: domain Description: PinE Location: 112 2 76-112 82 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ParE_toxin (pfam05016), RVT-GII, PRK15442 (beta-lactamase TEM; Provisional), PinE (COG1961)