myRT

myRT report for GCA_900607785.1_ecoli012

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Seq: UWWG01000004.1 (48515 bp)
Overview 1 RT 1: 16808-21418 bp Neighborhood of RT #1 [16808, 21423] RVT-GII Intron_maturas2 HNHc psiB Feature: gene Location: 16808-16990 bp Feature: gene Location: 17219-17428 bp Feature: gene Location: 17563-19464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17830-18661 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 7830-1 8661 bp Feature: domain Description: Intron_maturas2 Location: 18775-19033 bp Feature: domain Description: Intron_maturas2 Location: 1 8775-1 9033 bp Feature: domain Description: HNHc Note: nucleases Location: 19207-19369 bp Feature: domain Description: HNHc Note: nucleases Location: 1 9207-1 9369 bp Feature: gene Location: 19692-20936 bp Feature: gene Location: 20989-21423 bp Feature: domain Description: psiB Location: 20992-21418 bp Feature: domain Description: psiB Location: 20992-21 41 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), psiB (PRK13701)

Seq: UWWG01000001.1 (5042916 bp)
Overview 1 RT 1: 3151977-3156944 bp Neighborhood of RT #1 [3151977, 3157039] PRK09692 RVT-UG8 PRK09678 Feature: gene Location: 3151977-3153155 bp Feature: domain Description: PRK09692 Location: 3151983-3153141 bp Feature: domain Description: PRK09692 Location: 3151983-3153141 bp Feature: gene Location: 3153276-3153461 bp Feature: gene Location: 3154973-3155284 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 3154976-3155264 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 3154976-31552 64 bp Feature: gene Location: 3155296-3156021 bp Feature: gene Location: 3156767-3157039 bp Feature: domain Description: PRK09678 Location: 3156776-3156944 bp Feature: domain Description: PRK09678 Location: 3156776-3156944 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-UG8, PRK09678 (DNA-binding transcriptional regulator; Provisional)