myRT

myRT report for GCA_900607795.1_kpneu017

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Seq: UWWF01000001.1 (5451391 bp)
Overview 1 RT 1: 866118-872585 bp 2 RT 2: 4086079-4092474 bp 3 RT 3: 4530389-4536819 bp 4 RT 4: 4874811-4878265 bp 5 RT 5: 5058642-5064519 bp Neighborhood of RT #1 [866118, 872587] YccC PRK10016 RVT-GII dacD SbcB Neighborhood of RT #2 [4086079, 4092575] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #3 [4530389, 4536848] YbjK int RVT-GII Phage_CP76 Neighborhood of RT #4 [4874811, 4878267] RVT-GII RVT-GII PRK10276 umuC Neighborhood of RT #5 [5058642, 5064521] Rve PinE RVT-GII PRK10276 umuC Feature: gene Location: 866118-867176 bp Feature: domain Description: YccC Location: 866124-867162 bp Feature: domain Description: YccC Location: 8661 24-8671 62 bp Feature: gene Location: 867275-867748 bp Feature: domain Description: PRK10016 Location: 867278-867737 bp Feature: domain Description: PRK1 001 6 Location: 867278-867737 bp Feature: gene Location: 867745-869301 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 868138-868828 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8681 38-868828 bp Feature: gene Location: 869819-870988 bp Feature: domain Description: dacD Location: 869828-870983 bp Feature: domain Description: dacD Location: 869828-870983 bp Feature: gene Location: 871163-872587 bp Feature: domain Description: SbcB Location: 871169-872585 bp Feature: domain Description: SbcB Location: 871 1 69-872585 bp Feature: gene Location: 4086079-4089063 bp Feature: gene Location: 4089067-4089798 bp Feature: domain Description: Laminin_G_3 Location: 4089388-4089742 bp Feature: domain Description: Laminin_G_3 Location: 4089388-4089742 bp Feature: gene Location: 4090454-4091941 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4090859-4091549 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4090859-4091 549 bp Feature: gene Location: 4092031-4092210 bp Feature: gene Location: 4092258-4092575 bp Feature: domain Description: PRK10276 Location: 4092264-4092378 bp Feature: domain Description: PRK1 0276 Location: 4092264-4092378 bp Feature: domain Description: PRK10276 Location: 4092405-4092474 bp Feature: domain Description: PRK1 0276 Location: 4092405-4092474 bp Feature: gene Location: 4530389-4530952 bp Feature: domain Description: YbjK Location: 4530395-4530932 bp Feature: domain Description: YbjK Location: 4530395-4530932 bp Feature: gene Location: 4531074-4532126 bp Feature: domain Description: int Location: 4531077-4532076 bp Feature: domain Description: int Location: 4531 077-4532076 bp Feature: gene Location: 4532541-4534148 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4532937-4533627 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4532937-4533627 bp Feature: gene Location: 4536085-4536306 bp Feature: gene Location: 4536339-4536848 bp Feature: domain Description: Phage_CP76 Location: 4536351-4536819 bp Feature: domain Description: Phage_CP76 Location: 4536351 -453681 9 bp Feature: gene Location: 4874811-4875020 bp Feature: gene Location: 4875139-4875282 bp Feature: gene Location: 4875321-4875896 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4875420-4875789 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4875420-4875789 bp Feature: gene Location: 4875896-4876501 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4875899-4876109 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4875899-48761 09 bp Feature: gene Location: 4876580-4876999 bp Feature: domain Description: PRK10276 Location: 4876583-4876994 bp Feature: domain Description: PRK1 0276 Location: 4876583-4876994 bp Feature: gene Location: 4877002-4878267 bp Feature: domain Description: umuC Location: 4877005-4878265 bp Feature: domain Description: umuC Location: 4877005-4878265 bp Feature: gene Location: 5058642-5059358 bp Feature: domain Description: Rve Location: 5058657-5059302 bp Feature: domain Description: Rve Location: 5058657-5059302 bp Feature: gene Location: 5059364-5059873 bp Feature: domain Description: PinE Location: 5059412-5059865 bp Feature: domain Description: PinE Location: 505941 2-5059865 bp Feature: gene Location: 5061268-5062755 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5061673-5062363 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5061 673-5062363 bp Feature: gene Location: 5062835-5063254 bp Feature: domain Description: PRK10276 Location: 5062838-5063249 bp Feature: domain Description: PRK1 0276 Location: 5062838-5063249 bp Feature: gene Location: 5063256-5064521 bp Feature: domain Description: umuC Location: 5063259-5064519 bp Feature: domain Description: umuC Location: 5063259-506451 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925), Laminin_G_3 (pfam13385), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CP76 (pfam06892)
umuC (PRK03609), Rve (COG3316), PinE (COG1961)

Seq: UWWF01000002.1 (251770 bp)
Overview 1 RT 1: 188125-190941 bp Neighborhood of RT #1 [188125, 190941] RVT-GII Feature: gene Location: 188125-188346 bp Feature: gene Location: 188608-188838 bp Feature: gene Location: 189072-190271 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 189189-189879 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 189189-189879 bp Feature: gene Location: 190292-190654 bp Feature: gene Location: 190708-190941 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII