myRT

myRT report for GCA_900607805.1_ecoli013

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Seq: UWWH01000001.1 (4807171 bp)
Overview 1 RT 1: 275906-282460 bp 2 RT 2: 2134697-2139674 bp Neighborhood of RT #1 [275906, 282495] PRK11233 cbl RVT-UG12 Phage_int_SAM_2 Integrase_1 SfsB Neighborhood of RT #2 [2134697, 2139709] TnpB_IS66 PHA02517 RVT-GII GIIM zinc_ribbon_11 zinc_ribbon_11 Feature: gene Location: 275906-276823 bp Ori: VCX31928.1 Gene: gltC_1 Feature: domain Description: PRK11233 Location: 275909-276821 bp Feature: domain Description: PRK1 1 233 Location: 275909-276821 bp Feature: gene Location: 276925-277875 bp Ori: VCX31929.1 Gene: cbl Feature: domain Description: cbl Location: 276928-277873 bp Feature: domain Description: cbl Location: 276928-277873 bp Feature: gene Location: 278600-279640 bp Ori: VCX31930.1 Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 278951-279386 bp Feature: RT Description: RVT-UG1 2 Note: UG1 2 RT Location: 278951 -279386 bp Feature: gene Location: 280459-281166 bp Ori: VCX31931.1 Feature: domain Description: Phage_int_SAM_2 Location: 280465-280555 bp Feature: domain Description: Phage_int_SAM_2 Location: 280465-280555 bp Feature: domain Description: Integrase_1 Location: 280588-281032 bp Feature: domain Description: Integrase_1 Location: 280588-281 032 bp Feature: gene Location: 282247-282495 bp Ori: VCX31932.1 Feature: domain Description: SfsB Location: 282253-282460 bp Feature: domain Description: SfsB Location: 282253-282460 bp Feature: gene Location: 2134697-2134987 bp Ori: VCX33739.1 Feature: domain Description: TnpB_IS66 Location: 2134709-2134958 bp Feature: domain Description: TnpB_IS66 Location: 21 34709-21 34958 bp Feature: gene Location: 2134984-2135424 bp Ori: VCX33740.1 Feature: domain Description: PHA02517 Location: 2134987-2135395 bp Feature: domain Description: PHA0251 7 Location: 21 34987-21 35395 bp Feature: gene Location: 2135553-2137076 bp Ori: VCX33741.1 Gene: ltrA_1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2135826-2136558 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 35826-21 36558 bp Feature: domain Description: GIIM Note: maturase Location: 2136633-2136831 bp Feature: domain Description: GIIM Note: maturase Location: 21 36633-21 36831 bp Feature: gene Location: 2138886-2139320 bp Ori: VCX33742.1 Feature: domain Description: zinc_ribbon_11 Location: 2138892-2139264 bp Feature: domain Description: zinc_ribbon_1 1 Location: 21 38892-21 39264 bp Feature: gene Location: 2139308-2139709 bp Ori: VCX33743.1 Feature: domain Description: zinc_ribbon_11 Location: 2139320-2139674 bp Feature: domain Description: zinc_ribbon_1 1 Location: 21 39320-21 39674 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11233 (nitrogen assimilation transcriptional regulator; Provisional), cbl (PRK12679), RVT-UG12, Phage_int_SAM_2 (pfam12834), Integrase_1 (pfam12835), SfsB (COG3423), TnpB_IS66 (pfam05717), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)
zinc_ribbon_11 (pfam11682)

Seq: UWWH01000002.1 (161235 bp)
Overview 1 RT 1: 22836-26912 bp 2 RT 2: 148500-151942 bp Neighborhood of RT #1 [22836, 26917] PinE PRK15442 RVT-GII ParE_toxin Neighborhood of RT #2 [148500, 152079] PRK15442 PRK15442 RVT-GII ParE DDE_Tnp_IS1 Feature: gene Location: 22836-23393 bp Ori: VCX78120.1 Gene: tnpR_1 Feature: domain Description: PinE Location: 22839-23385 bp Feature: domain Description: PinE Location: 2 2 839-2 3385 bp Feature: gene Location: 23575-24435 bp Ori: VCX78121.1 Feature: domain Description: PRK15442 Location: 23584-24433 bp Feature: domain Description: PRK15442 Location: 2 3584-2 4433 bp Feature: gene Location: 25052-26107 bp Ori: VCX78122.1 Gene: ltrA_2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25337-26024 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 5337-2 602 4 bp Feature: gene Location: 26322-26573 bp Feature: gene Location: 26714-26917 bp Ori: VCX78124.1 Feature: domain Description: ParE_toxin Location: 26729-26912 bp Feature: domain Description: ParE_toxin Location: 2 672 9-2 6912 bp Feature: gene Location: 148500-148976 bp Ori: VCX78271.1 Feature: domain Description: PRK15442 Location: 148509-148959 bp Feature: domain Description: PRK15442 Location: 148509-148959 bp Feature: gene Location: 148945-149325 bp Ori: VCX78272.1 Feature: domain Description: PRK15442 Location: 148948-149317 bp Feature: domain Description: PRK15442 Location: 148948-149317 bp Feature: gene Location: 149963-151468 bp Ori: VCX78273.1 Gene: ltrA_3 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 150248-150935 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1502 48-150935 bp Feature: gene Location: 151619-151819 bp Ori: VCX78274.1 Feature: domain Description: ParE Location: 151664-151817 bp Feature: domain Description: ParE Location: 151664-151817 bp Feature: gene Location: 151828-152079 bp Ori: VCX78275.1 Feature: domain Description: DDE_Tnp_IS1 Location: 151831-151942 bp Feature: domain Description: DDE_Tnp_IS1 Location: 151831-151942 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), PRK15442 (beta-lactamase TEM; Provisional), RVT-GII, ParE_toxin (pfam05016), ParE (COG3668), DDE_Tnp_IS1 (pfam03400)