myRT

myRT report for GCA_900607875.1_kpneu022

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Seq: UWWN01000002.1 (194338 bp)
Overview 1 RT 1: 40814-44633 bp 2 RT 2: 70414-73987 bp 3 RT 3: 114802-118641 bp 4 RT 4: 178425-181719 bp Neighborhood of RT #1 [40814, 44633] InsE PHA02517 RVT-GII GIIM PHA02517 Neighborhood of RT #2 [70414, 74052] Tra5 RVT-GII GIIM PHA02517 Neighborhood of RT #3 [114802, 118641] InsE PHA02517 RVT-GII GIIM PHA02517 Neighborhood of RT #4 [178425, 181733] RVT-GII PRK10276 Feature: gene Location: 40814-41113 bp Feature: domain Description: InsE Location: 40823-41105 bp Feature: domain Description: InsE Location: 40823-41 1 05 bp Feature: gene Location: 41143-41568 bp Feature: domain Description: PHA02517 Location: 41167-41503 bp Feature: domain Description: PHA0251 7 Location: 41 1 67-41 503 bp Feature: gene Location: 42160-43683 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42433-43165 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42433-431 65 bp Feature: domain Description: GIIM Note: maturase Location: 43240-43438 bp Feature: domain Description: GIIM Note: maturase Location: 43240-43438 bp Feature: gene Location: 43848-44252 bp Feature: domain Description: PHA02517 Location: 43851-44241 bp Feature: domain Description: PHA0251 7 Location: 43851 -44241 bp Feature: gene Location: 44427-44633 bp Feature: gene Location: 70414-71103 bp Feature: domain Description: Tra5 Location: 70519-70945 bp Feature: domain Description: Tra5 Location: 7051 9-70945 bp Feature: gene Location: 71255-71440 bp Feature: gene Location: 71527-73050 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71800-72532 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71 800-72532 bp Feature: domain Description: GIIM Note: maturase Location: 72607-72805 bp Feature: domain Description: GIIM Note: maturase Location: 72607-72805 bp Feature: gene Location: 73004-73429 bp Feature: gene Location: 73642-74052 bp Feature: domain Description: PHA02517 Location: 73648-73987 bp Feature: domain Description: PHA0251 7 Location: 73648-73987 bp Feature: gene Location: 114802-115104 bp Feature: domain Description: InsE Location: 114811-115093 bp Feature: domain Description: InsE Location: 1 1 481 1 -1 1 5093 bp Feature: gene Location: 115131-115556 bp Feature: domain Description: PHA02517 Location: 115155-115491 bp Feature: domain Description: PHA0251 7 Location: 1 1 51 55-1 1 5491 bp Feature: gene Location: 116148-117671 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 116421-117153 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 6421 -1 1 71 53 bp Feature: domain Description: GIIM Note: maturase Location: 117228-117426 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 7228-1 1 7426 bp Feature: gene Location: 117794-118228 bp Feature: domain Description: PHA02517 Location: 117797-118220 bp Feature: domain Description: PHA0251 7 Location: 1 1 7797-1 1 8220 bp Feature: gene Location: 118504-118641 bp Feature: gene Location: 178425-178640 bp Feature: gene Location: 178907-179137 bp Feature: gene Location: 179371-180906 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 179776-180514 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 79776-1 8051 4 bp Feature: gene Location: 180957-181190 bp Feature: gene Location: 181308-181733 bp Feature: domain Description: PRK10276 Location: 181311-181719 bp Feature: domain Description: PRK1 0276 Location: 1 81 31 1 -1 81 71 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), Tra5 (COG2801), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: UWWN01000001.1 (5322841 bp)
Overview 1 RT 1: 763218-770086 bp Neighborhood of RT #1 [763218, 770088] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 763218-763946 bp Feature: domain Description: FimC Location: 763266-763929 bp Feature: domain Description: FimC Location: 7632 66-76392 9 bp Feature: gene Location: 763978-766587 bp Feature: domain Description: FimD Location: 764035-766576 bp Feature: domain Description: FimD Location: 764035-766576 bp Feature: gene Location: 766587-768665 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 766995-767439 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 766995-767439 bp Feature: gene Location: 768722-769162 bp Feature: domain Description: Integrase_1 Location: 768728-768944 bp Feature: domain Description: Integrase_1 Location: 76872 8-768944 bp Feature: gene Location: 769423-770088 bp Feature: domain Description: INT_P4_C Location: 769528-770086 bp Feature: domain Description: INT_P4_C Location: 76952 8-770086 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)